- Transcript HORVU6Hr1G011920.1
- Transcript IDHORVU6Hr1G011920.1
- Gene IDHORVU6Hr1G011920
Barley RTD
Exon Structure of HORVU6Hr1G011920.1
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr6H | 1 | 22242110 | 22240618 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1493 bp)
>HORVU6Hr1G011920.1 1493 150831_barley_pseudomolecules TCCCCCTTGGATCCCCTCCTATCCACACGTCTTTCAAGCCTCGAGGGCACACACACAGGG AACACAGGGAAAGAAGGAAAAAAGACAGGAAAAGCAACGCCCTCGCCGCCCCCGGGGTGT AAATGTTCTCCTCCGCCGGTTCTCCCCGAGATGATTCCTCCCCTCTCCTTCACTTCTCCA TCCCCTCCCCTAACCCTAGGGCCGGCTCTTCTTGCTCCTCATCCGATACCCAATGGACAT GGCTCTGTTGTGGAGTTTGTCTGTATGTCTCTTCTAATTGCAGAACACGACATATAGGTT CGGTAGCCTTTAAATATTGGTTGAAATTTAGGTGGCTATTTAGTTGTTTTTTATCAACAT GTAGTGGATTGTATGGATACTCATCTTGGTTTTTTTTCACCCATACACACTCCAGGATAG TACTGGGATCTTTGCTCGAGGTATAGTATTCTCTGAAAGCTTGTGAAACGAATCTTAGTT GCAATTTTGTGTAGCGAGGTAACTGCAAGGTTCAACCACTGCACTTTTGTGTGAAAGCAT GATTTTACGCAATACAGATTTTTTTTTCCATGATCAAAGAGGATACAGAGTGTTAGTGTA AAGCAAAACATATCTGCACTTTATTCAGTATTCAGGGAGAGCACTGAAGAAGCACTTGCT ATTTGTACCAAAAGTAATGCAAACCAATATTAGAAATGTGAATTCGCACATCTCTGGGAA CACTGTGAACTGAATGTTCAGTTTAGTGTTAGTGCTTCGGTTCAGTGTACTGAATTTTCA GTGTTAGTGCTTCAGTTCAATGTACTAAATTTTCAGTGTTAGTGCTTCAGTTCAGTGTTC AAACCATTGTACTGGTGTTGCGTGTTAACTGAATTTTCAGCTGAGATATGTGTGCTCACT TGTATTCTTGACTTCATTGTTGGCAGAGGGTAGTTATATCTGATATCTAGCGTATATGTC TCTAGTTGAATTGGTTCTAGTTTAATTTATGGCAGCATTGGTTCTCCATTCTCACATTAT ATGTGTCATCTATTCTATTCTGCTAGTACTATCTTCCATACTCAAAAGCATTATCCCGTG TTGCATTATCTTTGTTGGACATTCAAAAGTTGGAAAACTGATCGTGAGCAATTGCACAAG TACTTTGTGTTGCTGGATACAAATATTTTGTGGCTGTGTAAAATGTTGTTGTTGTGAAAG ATCACACATGGCATGTTGATTCCGAGTAATGATGTTACAAGAATTTATATTGTTGTTGCG ATATACTCCATGCATGTGATGAGATACCGATTCAAATTCATGCAAATTTATGTTGTTGCT ACAAAATTATTCCCCTGTAGCAGATCATATTTTTATTTGGACACCTTTACAATTTTGTAG CAAGCTCTTCTTGATAAAAAGATTGCATTTTTGAACGCTTGCACAATATTTGCATTCCCT GCCTACCAAACATTTGTTTCATATGAAGAGGATTGTGATTAGAGGGGTTTGAG