Transcript Data
Barley RTD
Links



Exon Structure of HORVU3Hr1G110480.11

ChromosomeExonStartStopDirection
chr3H1681733710681733534-
chr3H2681734115681733785-
chr3H3681734417681734396-


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7None-----
TAIR PP10None-----
BRACH PP3None-----




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (530 bp)

>HORVU3Hr1G110480.11 530 150831_barley_pseudomolecules
GATAACAATTTACCAAGTACAGATGAAGATGACATCGATCAAGAGCTGCTTGCGGAAGCA
GAGGCAGCATGGGCTCAACGTGAGTGGACCATCCAGCACGTCTTGTTCCCGTCGATGCGA
CTTTTCCTCAAGCCCCCTAAGTCGATGGCAACTGATGGAACGTTTGTCCAGGTGCCCCTC
CTAACCTCGGTTCAGCCCTCCTTCATAGTATATGTTTGTAGCTATACGTGCTTCAGTGTT
TTACTTATGCTGGTGCACCATAGTCTGTTACTGTGCTCCTGTCTATTTTTTACTGCTCAA
TGTCGGCACCACAATGCTGCCCATTACGTTTTTCATACAAGCATTGACATTGTGTTACCT
ATAAGCTATAATAAAGTGGTAAGATTCTGGCATCGAACACTTGCCGAAGTAATTTCCCCA
ACAATCACCAAGCCACATACAGACGACATTGTTCCGAGTATGCAAATCCGACTTTGTTTC
GACAGTGAGTCGCAACAACCAGTAGAAGTGCGAAATACCCCTTTTTTGTA