- Transcript HORVU3Hr1G061510.2
- Transcript IDHORVU3Hr1G061510.2
- Gene IDHORVU3Hr1G061510
Barley RTD
Exon Structure of HORVU3Hr1G061510.2
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr3H | 1 | 468069085 | 468068762 | - |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | LOC_Os03g21390.1 | +1 | 6e-36 | 119 | 59/66 (89%) | protein|expressed protein |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | Bradi1g20650.1.p | +1 | 3e-33 | 111 | 55/58 (95%) | pacid=32797822 transcript=Bradi1g20650.1 locus=Bradi1g20650 ID=Bradi1g20650.1.v3.1 annot-version=v3.1 |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (324 bp)
>HORVU3Hr1G061510.2 324 150831_barley_pseudomolecules GTTAGTTCAGTTATGATGGTCTGGTGGCTGGTGGCACATAAGTACCAAAATTTTCAACTA ACATAGTTGTGGTATTCATATACAGAGATGGGCTTGTGGATGCTGCTGGAGGGTTTTTTG CTTCTTGCAAATTCTTTGGCCATCCTGAATGAAGACCGCTTTCTTGGTCCCAGGGGCTGG AGCATGCCTGAAGTTTCAGGAAATGGGCAAACAAAGTCCTTGAAGGGGCAGATCGTGGGG CTCATCTACGCCACTCAGTTTTTGCGGATGCCCTTGATAGCGCTTAATATTCTTATCATT GTTGTGAAATTGGTGTCAGGCTGA