- Transcript HORVU3Hr1G018200.18
- Transcript IDHORVU3Hr1G018200.18
- Gene IDHORVU3Hr1G018200
Barley RTD
Exon Structure of HORVU3Hr1G018200.18
| Chromosome | Exon | Start | Stop | Direction |
|---|---|---|---|---|
| chr3H | 1 | 47559458 | 47559427 | + |
| chr3H | 2 | 47559849 | 47559802 | + |
| chr3H | 3 | 47560084 | 47560020 | + |
| chr3H | 4 | 47560433 | 47560173 | + |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | None | - | - | - | - | - |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (406 bp)
>HORVU3Hr1G018200.18 406 150831_barley_pseudomolecules GGGAATTTTGCCAACTATTGCAGACTGCTTGGGTATGCGCTAAAATCATCAATCATCTCT TTGTTGACATGGAAAAGCAGTTCAAGTGAAATCGCTGCAATGCGTCAACTCTTGGTAGAC CAACCAAACATACCGAAAGATGAAGTGCAATCTGTCTTCGACATTATATTTGCAGATGAA ATTTGCTAAGTTGAGCATGCATCCTACTATTGGAAGCCCTATTGCCAAGACATGTTGAAG CAACTGTATTTTGATCTACTCCTTCCGTTCATAAATATAAGCTTTTCTGACCTTTCTGTG AATCGGATATATATAGACACGTTTTAGTGTCTTTGTTCACTCATTTCACTCGTGTATGTA GTCCATATTGAAATATCCAAACCATGGTATATTTGTGAACGGAGGG