Transcript Data
Barley RTD
Links



Exon Structure of HORVU2Hr1G036050.4

ChromosomeExonStartStopDirection
chr2H1157574796157574053-
chr2H2157578774157578229-


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7 LOC_Os07g39620.2 +1 3e-65 216 171/259 (66%) protein|C2 domain containing protein, putative, expressed
TAIR PP10None-----
BRACH PP3 Bradi1g23257.3.p +1 2e-81 258 204/257 (79%) pacid=32801215 transcript=Bradi1g23257.3 locus=Bradi1g23257 ID=Bradi1g23257.3.v3.1 annot-version=v3.1




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (1290 bp)

>HORVU2Hr1G036050.4 1290 150831_barley_pseudomolecules
ATGGAGGCGGTTTCTGCGCCGGCCGCCGCTACGAACGGGGGCGGGGAGCTGATCGGGTAC
GTGGACGTGCACGTGCGGAGCGCGCGGGACATTCAGAACATCTGCATCTACCACAAGCAG
GATGTGTACGCGCGCCTGTCGCTGCCGGGGGAGGGCGCGCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNAATATGGAGTTCCCTGACATGAATCTTGTGGAGGAAAACCAGATTATGCTCTCG
GAATATGTTGGTCTGCCGTGCACGGCCATGGAAACGCAGAGCTCCGAGAGCCTCCTGACC
TCAGAGGACGTGGATGGCGCCGCCACCGAGTCCCACGACGCCGGCGTGCGAGTTGTGCAG
AGCTTCTCGACGGACTACAGCACCGCCGACTCCTCGGCCGGCGCCTTCCGGAGCGAGACG
GCAGTCAGCAGCGTGTCCACCACGGAGTCCCCGGCCGCGGCCGTCCCGGCTACCCCGCAG
TCCAACCCGTCCGAGCCGTCAGGAAACGCCCTCTCCTCAGCAGGCCAGAAGGAGAAGGCC
TCAGACGCGGCGGACGCGGCGGAGGTCGATTCGTCTCACACCGTTCAGGAGAGCCCGGCG
GTGAACTCACCCAGCACTGTGTCTGAGAACGCGGTGGACAAACCTCCGCCGGCGATGAGC
TTCAACTTCGAGCAGGAGGTGCAAGTGAACCAGAAGGAGATCATGGACATGTACATGAAG
AGCATGCAGCAGTTCACGGAGTCGCTGGCCAAGATGAAGCTCCCGCTGGACCTGGACAAT
GGCAGCGACAAGAGCGGGAGCGGCCCCGCCGCCGCCTCGCCCACTGATTCCAGCGGCACC
GACTCGAGCGCGGCGGCGAAGAAACCGACGGCCGGGGGTGCGCAGGAGAAATCTCCCAAG
GTGTTCTACGGAAGCCGAGCCTTCTTCTAA