Exon Structure of HORVU7Hr1G106780.8

ChromosomeExonStartStopDirection
chr7H1620784789620784719+
chr7H2620785405620785279+
chr7H3620786624620785866+
chr7H4620787133620786727+
chr7H5620788394620787261+
chr7H6620788805620788653+
chr7H7620789594620788920+


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7 LOC_Os06g46240.1 +1 0.0 638 343/550 (62%) protein|BTB/POZ domain containing protein, putative, expressed
TAIR PP10 AT1G04390 @ ARAPORT
AT1G04390.1 @ TAIR
+1 6e-69 248 145/362 (40%) Symbols: | BTB/POZ domain-containing protein | chr1:1179678-1183615 REVERSE LENGTH=849
BRACH PP3 Bradi1g32690.2.p +1 0.0 1483 780/1029 (76%) pacid=32804374 transcript=Bradi1g32690.2 locus=Bradi1g32690 ID=Bradi1g32690.2.v3.1 annot-version=v3.1




Barley PseudoMolecules GBrowse

Click here to see more tracks within GBrowse -->



grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (3326 bp)

>HORVU7Hr1G106780.8 3326 150831_barley_pseudomolecules
CATCTCCTCACCGACCGCGTCCTCTCCCTCCGCGCACGCCTGCACGACGCCCTCTCCCTC
GGCCTCGCCAGGTCTGATGGCCACGGTGCAAAAAAATGGCAGTCTACTGATGCTGGAATT
CAGTCTCACGCGATCAAAGCAGTGACTGCTTTTCTCGGTTGTTTGTCAACTGAAATGCTG
CGGCTTCCTCCTATAAAGGAGTCAATTTCGGATATTCTCGTACTCTTGGAAGGTGTTCTT
CAGACAAAGAACGTTTCAGTTCTGATCCAAGCAGCAGATGTGAGCTCAAAGTTAGTTTCC
AGCATAGGCAATTCGATTCGGCAATACTCAATTTTGGAGATTGTTTCGCCCCTCTCATGC
CAGTTGTCGGCACACCAGTTACCTACGGCTATCTCATGTGCAAGGGCAATAAACTGCATA
TTGAATAGCCTAGTGACAGCGAGAGGTTCAACTCATGCAGAAATTTTGGAAACCTTGGAG
AGAACCAATGCAGTTGCTAGTATTGTTTCAGCTCTGCAGAGTTACACTCTTGATGTCCAT
CCACTGAGTTATCTGACCGAGATGATATCACTGCTAAGAACCATACTGTGGACTTGGCCT
TCCTCAAGATACCATGTATGGAGTAACGGCGACCTGATGGGGAAGTTAGCACATTACTGT
CTTGCCACTGAAACAACGGTTGTAGCTAAAGTTCTGAGGCTGTATGCTGCTTTAGGTACA
TCTGTTTGGTAATTCTCCTCTTTGACTTCAAATATTAATATTTGAAATATATGTTTTTCT
ACTTTACTTCCTTTTTTGTTCCTAAACATTTGTAACTGCAACTCAGCTTTATGTGGCCAT
GGAGCTACGATCCTTCTCAAGAATGAAGTCTTAATGGCTAAGATTTGTGAGCTTGTGGGG
ACGTCCCATCCGACTAGTACTAGGATTGAAGCGTTCAAACTCTGCCATGTTCTTTTGAGA
TCTTCGAAGGGCTGTAGTCAGTTAATGACTTCACGTTGCCAGCCTATTGTTGAAGGCATA
ATCGATGCAATGCGTGCAAAGGATGATAAATTGTTAGTAACAGAGGGGTGTCGTACTGCA
CTGGTGGTCCTCCGTTATGCTGGGAATCATCATCAATGCTTTTGGTCTAATGCCATTGAT
AAAGTATTATATACCATTCTTACGGGCCGCTGCCTCTCCTCGCATCAAAGTGATCAAGTT
TTGTGCGATGATGAGCTATTTGATATGGTTTCCAAAAACTTCATGGATATACATCCATAC
GTCTGGGATATACTTGGATATCTAGTGGTGCATTGCACTGACAAGCACCATCCTGTAAGG
AAAGGGAAAGGTCATAGCTTGCACGCACTGATATCTTGTGCTTGCTTGCTGGCCACAGAT
GTTATGCGCAAAAGCAGCCCCATGAAATTGTCCAAAGATGTGCAGGAGCCGGCTTTGAGA
GCAGTTCTGATGATGCTTCTCTCTCCCAATGGATATATTCAGTATGAGGCAAGTTTTAAA
CTTTCAGAAGGTCTTCCGTATTTGGGTGATGGCTATTTGAACGTTCTATTGTCATCATTA
GAATCAAATGCTACGAGAAGTGTTGCCACATCTTTTGACAGTTTCAAAATTATGACCAAC
CTCATGAACCTAGCATGTTTGGTGCTGTCACGACCTTACCATAATCTCCTGAACAAGAGG
AATCCTATAGATGTGTTGTCCACCATTATCAAGGAATCTCTCCACAATCATATACATATT
ACGAGGTCAAAAGTCACTTCCCATCTGCATTTTTGTTTTGATGGAAGTTCATGCTGTTGC
TATCTCGGTGAAGAGTGGGAGGGTGAAAACATAGTTTTATTCTACGGTCTTGTTGTGCTG
TTTAATCTTATGAGGAGCACTACTTTAGTTTGTGTTCAGTGTAAGAGGAAGTTGGATGTT
GGAAATCTGTGCCATGACTGCAGAGATCAATATACAGAAGATTTTCTTATAGTTCTTCAA
CATGCTCTAAGTCAAAGCTTGAGTTCTGGACCGAAGCTCTATATTGCACACATCCTGAGT
TTGTTTGGCCTCTGTGGTTCTCCAAGCAAGTTGGGCGGGAAGATGACTAGTGCATTAGAT
AATAACGATCTAGCTGATCTGGAACTTTTGCTTTCAGATGGTGAATCTCTAAATGCTCAC
ACAGCCATCATATCAGCGAGGTGTCCTAAGCTGTTGCCATCTGTAAAATATCTACTTGGC
AGCGATGAAAAAGTTAAAGATGAATGGGGAAAATCAGTGTACCGAGTTCAGATGTCTGAT
CGTGTAGATAGTCGCGCCTTGAAGAAGATTTTGGAGTACACATATACTGGTTTTCTGATG
GTAGGCGATGACGTTGTTAAACCAGTAAGGACACTTGCGAAGTATTGTCACCTGAAACCA
TTGGCAGAAATGCTTCAGAAAGAGCAACCCAGATGGAACTCCGATTATGCCAGATATGAT
CTTAGTGCTGCACTTGGACCTGTTGAGCATTCATTCTCGGATATAATTTTGGAGGCTAGG
TCAAATGAGGAAATGAATTGTCACCATGGGTCGTGCCAATTGTCAACCCCGCACGTTCAT
AGCCATAAAATCGTGCTGACCATGAGCTGCGATTACCTCCGGGCATTATTTCGATCCGGG
ATGCATGAGAGCTTCTCCGACGTTATCAGGGTTCCGCTCGGGTGGCAAGCGCTGGACAAG
CTGGCTCACTGGTTCTACTCGGGCGAGCTGCCGAAAGCCGCCGTCGACTGCCGATGGAAC
AACCTGGGCAGCGACGAGCAGCGCGCCCACCTGAACGCCTACGCGGAGCTGTCGTCCCTG
TCCGAGTTCTGGTTCCTGGAGGGGGTGAAGGAGGAGAGCCTCGTCGCGGCGTCGTCCCTC
CTGGAGTCGAGCACGAGCGCCGCCGCGGTCGGGTTCGTCGCCTTCGCGGCCAGCCTGGGC
CAGTGGGAGATGGTGGACGCCGGCGTCCGGAGCGTGGCGCACCTGTACCCCCGGCTCCGG
GACTCCGGCGGGCTGGAGCGGCTCGACGACGAGCTGCTCAACATGCTGCGCACCGAGTAC
GTCCGCTACTCGCAGCACGGAGGCAGGCAGAGGTGACTGAATGATACGTACGTACATGGG
GGACCTGAATGCGCGTCGCCGTGCGCTATGTAGATCCCCCCCCAGGGATTGCTGCCATGC
TTTCTTCACAGAGAATAATGTGCAATGTAAGTAGTAGCATTATCGTCTGGGTTGCCAGAG
CGGAGAGCTGTTTGTTGCTCCTGCCTGCATGGCGCACATGGTCACGCGCAAAGGTGCAGG
TATCGGAGGACCGACCGGCCTGCTGA