Transcript Data
Barley RTD
Links



Exon Structure of HORVU5Hr1G068200.22

ChromosomeExonStartStopDirection
chr5H1516505090516504114+


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7None-----
TAIR PP10None-----
BRACH PP3None-----




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



CDS Sequence (977 bp)

>HORVU5Hr1G068200.22 977 150831_barley_pseudomolecules
ATCAAGCACCACAAATGCCATGCTTTAGCTCTTGACAACGGGACCTGTTTTTTCCTTTCT
CTTCAGGGATCTGGAGGACCTAGGTTCACTCTTCAGGCCCTTCAGCAGGGAAGTCCGGGT
GAAGTTCAGACAGAGACTCACTCTGTGAGTGAAGAATCCAAACAATCCTCAACTCACCCC
CGTCGCATTTTCAGAAGAATATGCCGCTTGCGGCCTGAGCAGGGACCATGCGTGCGCTGG
CTCTCACCATATGGCTCTGCTCATCTGCGCAATCTGCCAAGGGGACAAGAGAAAATGGAG
GCACCGAGGAAAAGGAGCGATGGTGCCTCTGCGTCACCACATGCACCGACCCGGCAGGCC
AGCAGCTAGCACAATGGTAAACAGGTGAAGGCCTCCTTTATCGTTGGCCTTTGCTGGTCC
TGTAGTTGCTTCAGGTGTAGCCCATTTGGGTGGGATTGGATGTACGCCACCATAGAACAT
TATTAGTATTATTATTTTGCTGCAATCGTTGCTGCTCTCGTGTCTTTACTTTGAGCTGTA
GGAGATGCTTCCTCAGGAGGGAAAAAAAAGGTGAACCAGATAAGGCGTTTTGCAGCTTTC
CAGCGTTCAGATAGAAAGCAAGCGTCGGGATAGAAAGTGTCCTACGACCACGAAGTGAGG
TTCCTCCCGTGACTTGACCCTCGTGCACCCTCACCCGTAGGCCGAAAGAAAGCAACGTTA
TGCAGGTCCAAACAAAACCGGATGCTTTTTGGCTGACAAGTTACCACATGATGTCACGTC
ACAAACAAAATCGATTGATTGTCAGTATAATTCACCTGTGGCCGCCCACGAGTTAGAAAT
GACAAGGTGGCATGACACTTTCTTTGGAGCAATTCTAGCGGACCCACTACGTCGCCAAAC
ATAATTCTTGTTTTCTTAGAGGTTGTTAGCATATGGCGTAGCTTCGTCTTACTTGCGAGG
TGCCAAACAAGAGAAAT