- Transcript HORVU2Hr1G036050.4
- Transcript IDHORVU2Hr1G036050.4
- Gene IDHORVU2Hr1G036050
Exon Structure of HORVU2Hr1G036050.4
Chromosome | Exon | Start | Stop | Direction |
---|---|---|---|---|
chr2H | 1 | 157574796 | 157574053 | - |
chr2H | 2 | 157578774 | 157578229 | - |
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology to Model Species (BLASTX to E-value < 1e-30)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP7 | LOC_Os07g39620.2 | +1 | 3e-65 | 216 | 171/259 (66%) | protein|C2 domain containing protein, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |
BRACH PP3 | Bradi1g23257.3.p | +1 | 2e-81 | 258 | 204/257 (79%) | pacid=32801215 transcript=Bradi1g23257.3 locus=Bradi1g23257 ID=Bradi1g23257.3.v3.1 annot-version=v3.1 |
Barley PseudoMolecules GBrowse
Click here to see more tracks within GBrowse -->
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
CDS Sequence (1290 bp)
>HORVU2Hr1G036050.4 1290 150831_barley_pseudomolecules ATGGAGGCGGTTTCTGCGCCGGCCGCCGCTACGAACGGGGGCGGGGAGCTGATCGGGTAC GTGGACGTGCACGTGCGGAGCGCGCGGGACATTCAGAACATCTGCATCTACCACAAGCAG GATGTGTACGCGCGCCTGTCGCTGCCGGGGGAGGGCGCGCNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAATATGGAGTTCCCTGACATGAATCTTGTGGAGGAAAACCAGATTATGCTCTCG GAATATGTTGGTCTGCCGTGCACGGCCATGGAAACGCAGAGCTCCGAGAGCCTCCTGACC TCAGAGGACGTGGATGGCGCCGCCACCGAGTCCCACGACGCCGGCGTGCGAGTTGTGCAG AGCTTCTCGACGGACTACAGCACCGCCGACTCCTCGGCCGGCGCCTTCCGGAGCGAGACG GCAGTCAGCAGCGTGTCCACCACGGAGTCCCCGGCCGCGGCCGTCCCGGCTACCCCGCAG TCCAACCCGTCCGAGCCGTCAGGAAACGCCCTCTCCTCAGCAGGCCAGAAGGAGAAGGCC TCAGACGCGGCGGACGCGGCGGAGGTCGATTCGTCTCACACCGTTCAGGAGAGCCCGGCG GTGAACTCACCCAGCACTGTGTCTGAGAACGCGGTGGACAAACCTCCGCCGGCGATGAGC TTCAACTTCGAGCAGGAGGTGCAAGTGAACCAGAAGGAGATCATGGACATGTACATGAAG AGCATGCAGCAGTTCACGGAGTCGCTGGCCAAGATGAAGCTCCCGCTGGACCTGGACAAT GGCAGCGACAAGAGCGGGAGCGGCCCCGCCGCCGCCTCGCCCACTGATTCCAGCGGCACC GACTCGAGCGCGGCGGCGAAGAAACCGACGGCCGGGGGTGCGCAGGAGAAATCTCCCAAG GTGTTCTACGGAAGCCGAGCCTTCTTCTAA