Probe CUST_44442_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_44442_PI426222305 | JHI_St_60k_v1 | DMT400025109 | TGGGGGTATGGAGAATTGTGCAATTCTTCTCATTGACATATGTTAATACCTTTGAGATCT |
All Microarray Probes Designed to Gene DMG400009700
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_44442_PI426222305 | JHI_St_60k_v1 | DMT400025109 | TGGGGGTATGGAGAATTGTGCAATTCTTCTCATTGACATATGTTAATACCTTTGAGATCT |
Microarray Signals from CUST_44442_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 397.211 | 23.1877 | 0.884858 | 0.0826123 |
| ABA 1h | 216.217 | 56.5013 | 0.511818 | 0.0954554 |
| ACC 1h | 221.63 | 75.8605 | 0.411457 | 0.157804 |
| BABA 1h | 369.894 | 71.5025 | 0.823145 | 0.0927753 |
| Chitin 1h | 308.576 | 45.102 | 0.749207 | 0.11524 |
| Epi 1h | 338.064 | 87.7086 | 0.7976 | 0.260004 |
| SA 1h | 254.39 | 38.0175 | 0.539894 | 0.0868715 |
| Me-JA 1h | 96.3738 | 6.3616 | 0.263417 | 0.0173509 |
| Control 6h | 1177.74 | 275.438 | 2.49407 | 0.465468 |
| ABA 6h | 582.849 | 94.7192 | 1.19497 | 0.244442 |
| ACC 6h | 1018.04 | 186.341 | 1.90558 | 0.336203 |
| BABA 6h | 1395.16 | 307.057 | 2.65797 | 0.61468 |
| Chitin 6h | 1395.02 | 80.8812 | 2.91856 | 0.168658 |
| Epi 6h | 1307.88 | 75.7343 | 2.58689 | 0.149519 |
| SA 6h | 968.515 | 148.412 | 2.12989 | 0.123228 |
| Me-JA 6h | 530.034 | 237.324 | 0.939654 | 0.454043 |
Source Transcript PGSC0003DMT400025109 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G57950.1 | +2 | 2e-37 | 134 | 76/150 (51%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:21460423-21460968 FORWARD LENGTH=181 |