Probe CUST_40055_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_40055_PI426222305 | JHI_St_60k_v1 | DMT400015253 | GCCAGTTGTTTGGTATAAAGTTACTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGC |
All Microarray Probes Designed to Gene DMG400005950
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_40083_PI426222305 | JHI_St_60k_v1 | DMT400015251 | CTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGCATGCAATTACTGTTATGTTTGTG |
| CUST_40076_PI426222305 | JHI_St_60k_v1 | DMT400015249 | CGTTTTGCTGTTCAGGATTATAACAATACACAGAATGCTCATTTGGAGTTTGTAGAAGTT |
| CUST_40113_PI426222305 | JHI_St_60k_v1 | DMT400015250 | CTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGCATGCAATTACTGTTATGTTTGTG |
| CUST_40101_PI426222305 | JHI_St_60k_v1 | DMT400015254 | CTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGCATGCAATTACTGTTATGTTTGTG |
| CUST_40055_PI426222305 | JHI_St_60k_v1 | DMT400015253 | GCCAGTTGTTTGGTATAAAGTTACTATTATGCTTGTGTGAAATAAAGCCAGTTGTTTGGC |
| CUST_40138_PI426222305 | JHI_St_60k_v1 | DMT400015252 | TCGTTTTGCTGTTCAGGATCATAATAAGAAAGAGAATGCTCATTTGGAGTTTGTAGAAGT |
Microarray Signals from CUST_40055_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1686.58 | 186.831 | 0.389537 | 0.0671335 |
| ABA 1h | 2041.15 | 614.128 | 0.488562 | 0.128809 |
| ACC 1h | 3832.26 | 302.913 | 0.866307 | 0.13017 |
| BABA 1h | 3758.02 | 569.103 | 0.889616 | 0.0689542 |
| Chitin 1h | 2870.89 | 217.694 | 0.74159 | 0.0428251 |
| Epi 1h | 2403.35 | 545.587 | 0.611889 | 0.154416 |
| SA 1h | 4050.61 | 1176.27 | 0.853486 | 0.253337 |
| Me-JA 1h | 7441.31 | 866.807 | 2.09817 | 0.12655 |
| Control 6h | 7191.83 | 3080.6 | 1.32903 | 0.639189 |
| ABA 6h | 7273.93 | 893.336 | 1.57241 | 0.236789 |
| ACC 6h | 6547.62 | 1203.97 | 1.28276 | 0.226342 |
| BABA 6h | 9847.33 | 862.281 | 2.04041 | 0.134211 |
| Chitin 6h | 10011.4 | 2516.75 | 2.05868 | 0.601745 |
| Epi 6h | 3497.08 | 1286.5 | 0.61844 | 0.366832 |
| SA 6h | 3715.34 | 1253.62 | 0.735905 | 0.277122 |
| Me-JA 6h | 35568.9 | 8238.67 | 7.84614 | 1.37987 |
Source Transcript PGSC0003DMT400015253 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G12490.2 | +1 | 1e-24 | 99 | 49/92 (53%) | cystatin B | chr3:3960523-3961876 REVERSE LENGTH=234 |