Probe CUST_2997_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2997_PI426222305 | JHI_St_60k_v1 | DMT400000187 | GCGTGTTTTTCTTCTTGTTGTGGTCCCAATTTTACTTTGAAAATTTCAGTTACATACGCT |
All Microarray Probes Designed to Gene DMG401000056
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2997_PI426222305 | JHI_St_60k_v1 | DMT400000187 | GCGTGTTTTTCTTCTTGTTGTGGTCCCAATTTTACTTTGAAAATTTCAGTTACATACGCT |
| CUST_3241_PI426222305 | JHI_St_60k_v1 | DMT400000186 | ATAACAGAATGACTATAATAGTGGGAACAGCAAAAGCTTTAGCATATCTTCACGAGGGTC |
| CUST_2788_PI426222305 | JHI_St_60k_v1 | DMT400000188 | ACGTAGCTTGACTGCTAGTTATCTATGTATACCACAGTTTAGCATATCTTCACGAGGGTC |
Microarray Signals from CUST_2997_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 53.2768 | 4.44137 | 0.608166 | 0.0507303 |
| ABA 1h | 97.578 | 8.46432 | 1.25105 | 0.0825495 |
| ACC 1h | 61.6608 | 9.64444 | 0.666892 | 0.0626084 |
| BABA 1h | 65.0949 | 7.82046 | 0.761046 | 0.074866 |
| Chitin 1h | 42.8176 | 11.1964 | 0.509958 | 0.153776 |
| Epi 1h | 58.5397 | 17.5407 | 0.684592 | 0.273212 |
| SA 1h | 41.3515 | 3.98623 | 0.459351 | 0.0443685 |
| Me-JA 1h | 10.2175 | 3.33363 | 0.135211 | 0.0516117 |
| Control 6h | 124.855 | 27.2301 | 1.3441 | 0.209022 |
| ABA 6h | 399.782 | 49.5197 | 4.23401 | 0.290126 |
| ACC 6h | 149.305 | 17.4574 | 1.46763 | 0.0930265 |
| BABA 6h | 160.524 | 38.1343 | 1.55326 | 0.304766 |
| Chitin 6h | 130.26 | 17.3949 | 1.3746 | 0.220469 |
| Epi 6h | 129.228 | 28.7611 | 1.24423 | 0.351877 |
| SA 6h | 93.9815 | 21.4091 | 1.02355 | 0.395322 |
| Me-JA 6h | 101.74 | 32.5378 | 1.03254 | 0.344152 |
Source Transcript PGSC0003DMT400000187 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G01540.2 | +1 | 6e-14 | 71 | 47/81 (58%) | Protein kinase superfamily protein | chr1:195980-198383 FORWARD LENGTH=472 |