Probe CUST_26934_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_26934_PI426222305 | JHI_St_60k_v1 | DMT400067168 | GCCCTGTCTACATATAGGTTAGGTAAGTGTTACAATTTCGTCTTCATTAATGCATAGTTA |
All Microarray Probes Designed to Gene DMG400026113
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_26934_PI426222305 | JHI_St_60k_v1 | DMT400067168 | GCCCTGTCTACATATAGGTTAGGTAAGTGTTACAATTTCGTCTTCATTAATGCATAGTTA |
Microarray Signals from CUST_26934_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 724.959 | 42.0523 | 1.02621 | 0.0593837 |
| ABA 1h | 399.886 | 25.1423 | 0.638976 | 0.0371516 |
| ACC 1h | 696.927 | 170.696 | 0.894952 | 0.188423 |
| BABA 1h | 626.744 | 75.3214 | 0.910122 | 0.208894 |
| Chitin 1h | 603.137 | 80.8655 | 0.935123 | 0.118462 |
| Epi 1h | 549.773 | 65.1338 | 0.887946 | 0.10451 |
| SA 1h | 768.625 | 198.269 | 0.980299 | 0.364658 |
| Me-JA 1h | 447.817 | 26.0451 | 0.777469 | 0.0939365 |
| Control 6h | 1103.86 | 307.158 | 1.40392 | 0.380662 |
| ABA 6h | 161.042 | 46.0372 | 0.198906 | 0.0668676 |
| ACC 6h | 694.296 | 127.021 | 0.832672 | 0.0482618 |
| BABA 6h | 964.499 | 55.9212 | 1.2194 | 0.0898496 |
| Chitin 6h | 1019.47 | 103.49 | 1.34499 | 0.163493 |
| Epi 6h | 797.518 | 109.646 | 0.982506 | 0.222796 |
| SA 6h | 836.322 | 79.3498 | 1.18811 | 0.0687498 |
| Me-JA 6h | 1274.16 | 189.728 | 1.7721 | 0.132708 |
Source Transcript PGSC0003DMT400067168 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G71970.1 | +1 | 7e-24 | 99 | 69/170 (41%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | chr1:27093099-27093776 FORWARD LENGTH=225 |