Probe CUST_1297_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1297_PI426222305 | JHI_St_60k_v1 | DMT400093397 | ATTCGCAAGTTCTTCAGATTGCCAAATGGAAGATCAGCCACCTTCTGGTATGGACTTACC |
All Microarray Probes Designed to Gene DMG400042968
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1297_PI426222305 | JHI_St_60k_v1 | DMT400093397 | ATTCGCAAGTTCTTCAGATTGCCAAATGGAAGATCAGCCACCTTCTGGTATGGACTTACC |
Microarray Signals from CUST_1297_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 705.325 | 105.536 | 1.17769 | 0.144822 |
| ABA 1h | 340.122 | 31.3447 | 0.652903 | 0.0382966 |
| ACC 1h | 514.324 | 111.194 | 0.818083 | 0.123851 |
| BABA 1h | 436.719 | 73.8826 | 0.751365 | 0.0633495 |
| Chitin 1h | 373.312 | 44.7608 | 0.699495 | 0.0511833 |
| Epi 1h | 371.513 | 21.7478 | 0.734268 | 0.0429598 |
| SA 1h | 344.888 | 39.2158 | 0.567184 | 0.0332906 |
| Me-JA 1h | 135.698 | 8.70463 | 0.283528 | 0.0181117 |
| Control 6h | 995.956 | 175.608 | 1.64146 | 0.179607 |
| ABA 6h | 456.926 | 26.6814 | 0.735511 | 0.0527192 |
| ACC 6h | 941.172 | 110.63 | 1.38421 | 0.100514 |
| BABA 6h | 924.952 | 163.241 | 1.3733 | 0.215987 |
| Chitin 6h | 1009.43 | 58.4794 | 1.62207 | 0.0938974 |
| Epi 6h | 933.191 | 72.7492 | 1.40854 | 0.160893 |
| SA 6h | 718.049 | 41.7871 | 1.23875 | 0.11733 |
| Me-JA 6h | 803.732 | 152.566 | 1.32652 | 0.165859 |
Source Transcript PGSC0003DMT400093397 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g087040.1 | +1 | 0.0 | 610 | 380/393 (97%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch02 gene_region:44158457-44159629 transcript_region:SL2.50ch02:44158457..44159629- go_terms:GO:0008270 functional_description:RING finger protein (AHRD V1 ***- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type |
| TAIR PP10 | AT5G40250.1 | +1 | 4e-105 | 318 | 193/320 (60%) | RING/U-box superfamily protein | chr5:16086056-16087186 FORWARD LENGTH=376 |