Microarray Probes on PGSC0003DMT400096975
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15246_PI426222305 |
JHI_St_60k_v1 |
CAAACTTTGGCTGCTCAACAAACATTAGCCAAATTAGTAAGGATGAGGAGCAAAATATGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400096975
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400096975 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56220.1 |
+1 |
0.0 |
1229 |
642/960 (67%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:22754871-22757792 FORWARD LENGTH=973 |
Transcript Sequence (2910 bp)
>PGSC0003DMT400096975 2910 pgsc_dm_v3.4
ATGGATGAAGAGGAAATTCCTGTTGTTGATACTCAATCCCTTACCATCAAGATTGCAAAT
TCAGGTCAGCAAAAACTGACAGCAACATCATCTCCATATAACTCACCTTCTCTCATTTCT
CCTCCATCTTCTGCATTTGTTTCAGCATTACAATCACCTTACATTTCTCCAAGAGCCACT
TTAGTTACAAATCCAACTCAAGAAAATCAAGAAACTCTCATTGCTTCTCTTACCTCAGTT
GTCCATCCATCCCCACCAGTCTCATACTGCGGTTCGCAATCTGATGATGTTCCCAGCACC
TCCTACACTCCACCACCAGAAAGATATGATTTTTCTGATGATCCTACAGGCACAAAGCTC
AAGATTGTCACCTGTGTCCCAGTTTCAGGACCGGAAACCGATCCCAGGATATCATTTTCT
TTCCCTGTCCCTCGAATTTCGTTTGCCAAGGGGTCAGTTTCACCGGCTTCCAATGCTAAA
CTTAGGAGCTGTGATGTGTATATAGGATTCCATGGTCAGAACCCGAATTTAGTACGCTTC
TGTAAGTGGCTCAAATCAGAACTTGAGCTTCAGGGAATTGCTTGTTTTATTGCTGATAGA
GCAAAGTATGCAGATAATCAGAGCCATGAGATTGCTGACAGAGTTATATGCTCAGTAACC
TTTGGTGTCATAGTTGTCACTGGTTGTAGCTTTTTCAACCATCTTAGCTTGGAGGAAATA
AGATTCTTCGCGCAAAAGAAGAACTTGATTCCTTTGTTCTTTAACACGGATGCCAATGAA
ATTGCAAGTCTTTCTAACTGTAATGGTGATACCAAGAAATGTAAAGAGGCACTGGATGTA
ATACTTAAGTGCCATGAGTTTAGATTGGAGACAGATGAGAGTAATTGGAGATCTTGTGTG
TCGAAAGCAGCTGGGATATTAAGGGCCAAGCTTGGTAGGAAAAGTGTTGTAGAAAAGTGT
ACAGAAGGCTTTGAAGAGTTGCCCTTTCCAAGGAATAAAAGTTTTGTGGGAAGAGAGAAG
GAAATTATCGATATAGAGACGACTCTTTTTGGCTGTGGTGATTCTTTCGATCAAGAAAGT
TCTGTCCCAAGTGTCAAAGGAGGAACACCAGGACAATCTGAAGGTCTGGCTGATGATGAA
AGTGAAGCTGATGTTGGCAGAGGCAAATACATAAATCTAGAGCTAGGAAAGAACAAGGAA
ACAAATAAAGAAGCTTGGGCTGAACGAAATTCGCTGAAGAGATCCAAGTACAAAAAATCA
AGAAGTGGGAAGGATATGAATTTGAGAATGAGTGTTGTATGCATAAATGGGTTGGCTGGT
GTTGGAAAGACGGACCTCGCTTTGGAATTCGCTTACAGGTATTCACAGAGATACAAGATG
GTCTTGTGGGTAGGGGGTGAAGCTCGCTATTTTCGACAGAACATATTGAACTTGTCTCTA
AATTTGGAACTGGATGTGAGTGCAGATGCAGAGAAGGAAAGAGGGAGGATAAGGAGTTTT
GATGAGCAAGAATCGGAAGCATTCAAGAGAGTTAAAAGGGAGATGTTCCGCGACATGCCA
TATTTACTAATTATAGACAATTTAGAGACTGAGAAGGAGTGGTGGGAAGGGAAGGATCTT
CATGATTTGATACCAACTAACACTGGCGGTACCCATGTAATTATCACAACACAACTCAAC
CGAGTAATGAACTTTGATCCGTTGCAGCTGCAGCCATTGACCACACCTGATGCCATGATA
TTGATAAGGGGAAGACGTAAAAGGGAGTATCCGGCTGGTGAGGTAGAATTCCTCCATAAA
TTTGATGAGAAATTGGGAAGGTCTAGTTTTGGTCTGTGGGTGGTTGGTTCCTTGCTATCG
GAGCTTGCAATATTGCCCTCTGCTCTATTCGAAGATGTGAATCAGGTTCCAGTTGAAGAA
ACCACAAGTTGCTCTAATCTATCCATTCCACATCAACAATTCTGTAGAACCAATCCATTT
TTAATGAAAACATTGATTTTTTGTACAACCCTCTTGCAGCAAAGCAGCGATAGCAGGGAC
TCCGTTGCTTCAAGAATGCTTCAGGTAGGGGCATGGTTTGCTCCAGCACCCATCTCGGTG
AATTTACTGGCAGCAGCTGCAAAGAAAATTCCTGTAAACACAAACAGGTTCAAAAAGTGG
ACTAATTGTATGAGAGTTGCTCTATGCTTCTACTCAGGTCACTGCCTCACAAGCCAAGCA
TGGAAGAGCGAAGAGGAATCAGCACTGCTACTAGTTAAACTTGGTTTGGCACGAAAAGCA
AACAGGCAAACAGGATGCTGGATCCAATTCCATCCCATCACGCAGATTTTTGCGAAAAGG
AAAGATGGACTAGTTGCTGCTAAAGCCAATGTTCAAGGTGCAAGGAAACTTGGAAACCCG
GTAACAGATTCTGACCATCTTTGGGCATGTGCTTTCCTTGTGTTTGGTTTCAAGTCCGAA
CCACCAGTTGTTCAGCTCAAGGCGATGGACATGGTTTTCTTCATCAGAAAAACAGCTCTT
CCTTTAGCAATCAGTGCCTTCACAACATTCTCAAGATGCAACTCGGCCTTAGAACTCTTG
AAGGTCTGCACAAATGTGCTCGAAGAAGCAGAGAAGTCATTTGTTTCTCAAATACAGGAT
TGGTGCCACGGATCTCTCTGCTGGAAAAAGAAGCTTCAATCTAACCAAAGAGTGGACGAG
TATGTTTGGCAAGAGGTGACATTATTGAAAGCTACCCTACTGGAAACTAGAGCAAAGCTG
CTACTAAGAGGAGGTCATTTCGATAGCGGAGAGGATCTTTGCAGAACCTGCATTAGTATC
CGAACCGTAATGTTGGGTCATAACCATGCTCAAACTTTGGCTGCTCAACAAACATTAGCC
AAATTAGTAAGGATGAGGAGCAAAATATGA
