Microarray Probes on PGSC0003DMT400093652
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21518_PI426222305 |
JHI_St_60k_v1 |
TATATGATGAATCCGGATGGTAATGGAGGACCTGAACTCAGTATTTTTCTTCTTAGAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400093652
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400093652 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41660.1 |
+1 |
3e-78 |
243 |
131/211 (62%) |
Protein of unknown function, DUF617 | chr2:17367945-17368838 FORWARD LENGTH=297 |
Transcript Sequence (849 bp)
>PGSC0003DMT400093652 849 pgsc_dm_v3.4
ATGAGACAAGCACAACAACAACAACAACCATTTGCTGCTCTTCCGCGAACAAGCAGCTGC
AAAAGCTCGAAAAAAATCATACCTGCAAATAACAATACTTATTCGCGGTCTTACTCTTCA
GCAACCCGTGATTATTCAACTGACAAATCTCTCGTTCTTCCTAACAACGGAAGCTCATCA
TCGTCTTCTTCGAACAATTTCAATCGATTAACCAAAACTCGAATCGGAGTTTCATCTCTC
CTCCGATCACTCATCAGCATCATCTCATTCCCTTCAGTACTCCCAACTTGCCGATGGCTA
AATCTCCCGAATCAGTTCTCAATTACCCCATCCCTCGGCCGGAAAGTCACCGGAACTTTA
TTCGGTCACCGGAGAGGCCATGTCAGCTTCGCCGTACAAGACGATCCGAAATCCGACCCG
GTTTTACTAATCGAGCTCGCAGTTTCTACGTCGTCGTTAGTGAAAGAGATGTCGTCGGGA
TTGGTCAGAATTGCGTTAGAATGTGAGAAAACAGCGGCGCCGGGAGGTAGCCGGAAGAGA
TTAGGGCTATTTGAAGAGCCGATGTGGACGATGTATTGTAACGGGAGGAAATGTGGGTAT
GCAACATCGAGGTTATGTACGGATTCCGATTGGCATGTGTTGAGTACGGTGCAGAGTGTT
TCCGTCGGCGCCGGAGTAATTCCGGTGGTGGATGATGGCCGGAAAATTAGTGCGGCGGAA
GGTGAGTTGTTGTATATGAGAGCGAAATTTGAACGAGTTGTAGGGAGTCGTGACTCGGAA
GCTTTTTATATGATGAATCCGGATGGTAATGGAGGACCTGAACTCAGTATTTTTCTTCTT
AGAATATGA
