Microarray Probes on PGSC0003DMT400086558
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24003_PI426222305 |
JHI_St_60k_v1 |
GTTGTTAACAATCAGATAAAAGCTGTAGACATGCTTTGCCAAGGTGACGAGATGGACATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400086558
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400086558 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G26040.1 |
+1 |
1e-65 |
219 |
141/430 (33%) |
HXXXD-type acyl-transferase family protein | chr3:9519741-9521069 FORWARD LENGTH=442 |
Transcript Sequence (1266 bp)
>PGSC0003DMT400086558 1266 pgsc_dm_v3.4
ATGTTGAAGCCCTCAATTCCTACCCCGAATCACCTTCAGACCCTCAAGCTTTCATTTTTC
GATCAGATGGTTCCTCGTGCATATGTACCAGTACTCTTCCACTACTTGCCAAGCTGCAGT
ACGACTACTGAAAGATGTGATAAGTTGCAAAAATCTTTGGCCCAGATATTAACCAACTTT
TACCCTATAGCAGGGAGATTTAATGAAGATGAATTCTCAATTCAGTGCAATGATGAAGGT
GTTGAGTATGTCCAAACCAAAGTCAGCGCGGATCTTGCTGAATTTCTTCACCAAGGACCC
AACACTGAGCTTTTGAATGATTTTCTTCCATGGCCTAGTGCTGTTCCACCATACTCAGAT
CTACCATCAAGTCCATTACTTGGTGTCCAAGTGAACCTATTCAATTGTGGAGGACTAGTC
ATGGGCATACAAATTTCACACATCGTAGCTGATGCTTTCACTTTAGCAACATTTGTCAAG
GAATGGGCGCACACTTGCCTTACAGGAACGACAAAAGATTGTCTCCCAAGTTTTGGTCAC
TTGTCATCGCTATTTCCCACAAGAGTGCTATCAGGAATTCAATATTCACCACCATCCAAC
AGGGGCACTAAGAGTTTCACGAGGAGGTTTGTGTTTGATGCTTTGGCGATAACTAAGCTC
AAAAATACAATCAAATATTCAAGTGCCATTAAGCCTACTAGAGTGATGGTCGTTATGTCG
TTAATATGGAAGGTTCTTGCAGGCATTTCCACCGCCAAAAATGGACATTCAAGGGGATCA
TCTTTTTTATTTCCTATTAATTTGAGAGGAAAATCAAAGTTACCATCTTTAGAACATGCT
CTAGGTAATGGTACCATGTTTGGAATTGCTGATCTAGAGGCAAGCCAGGAGTTGAATCAT
GAGTTGGTAGGAAATACAATACGGGACACATGCGTAAGCATTGGTAAGGCGGCAAGAGTT
GATGATGTTTTCTGTTTAGTTGTTAACAATCAGATAAAAGCTGTAGACATGCTTTGCCAA
GGTGACGAGATGGACATTTATTCGTGCACTAGTTGGTGTGGATTCTCTTGGTATGAAGCT
GACTTTGGTTGGGGAAAGCCATTCTGGGTGAGCTCCGTTAGCCTTGATGCTATTGAAGTC
ATTATGCTGATGGACACAAAGGATAGTGATGGAGTAGAAGCATGGGTTAGTTTGAAGGAG
AATGACATGGCTGAATTCGAGAGAGATGATGATATCTTGACATTTTGTTCTCCACTTCCA
AAGTAG
