Microarray Probes on PGSC0003DMT400084521
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40909_PI426222305 |
JHI_St_60k_v1 |
GTTTTGTGCACTTCTTAACTAGGACTTCAACTAAAACCCTTTGTAAGATGATGCATAACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084521
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084521 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G23960.1 |
+3 |
5e-71 |
184 |
89/204 (44%) |
terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=547 |
Transcript Sequence (2478 bp)
>PGSC0003DMT400084521 2478 pgsc_dm_v3.4
ATTCATCCAATTGGAAATGTAGTACTTTTCTACAATTGCTTTATATGCATTTTTTGGTTA
CCATTTATGTCATCAACTTGAAAGTTTCTTTCATTCTTCCTTAGTATAATCAAAATCACT
CTTATTATTTGTTTCAACAATGGCCTTACCTATAGTTGAAGAAGAGAATATAATTCGCCC
CGTGGCCAACTTCACTCCAAGTCTATGGGGTGATCGTTTCCTTTCCTTCTCCATTGACAA
TCGCGTTGCACAAAAGTATGCTCAAGAGATTGAAGCATTGAAGGAAGAAACAAGGAGTAT
GTTGTTAGCTATTACTGGAAGGAAATTGGTTGAGAAATTGAATTTTATTGATGTTATTGA
ACGTCTTGGCATCGCGTACCACTATGAGAAAGAAATCGATGAGATTTTGTATCGAATTTA
CAATGAAAATTCAAAATTTGAGGGTGATGAGTATAATGATTTATGCATTTGTGCTCTTCA
ATTTCGATTGCTAAGGCAACATGGTTACAATATCTCTCTTAGTAAGTACTAAAACTTCAC
GAATAATGTTGTATAGTTATGTAATATTACTATTCATTTGCTAGAAGGGTAATAATATTT
GTGCTATTCCTTGTAAATTATCAGAAATTTTCAACAAATTTCAAGATGGGAATGGAAAAT
TCAAGGAGTCGCGTGCTAGTGATGATGATGTTTTAGGATTATTGAGTTTATACGAAGCTT
CACATGTAAGGACACATGGTGAAGATTTCTTAGAAGATGCACTTGTTTTCTCCACTACTC
ATCTTGAGTCCGCGACTCCACATTTGAACTCTCCTCTTAAAGAGCAAGTAACACATGCCC
TTGAGCAATCTTTGCACAAGGGCATTCCTCGAGTAGAGACTCGATTCTTCATATCCTCAA
TCTATGAGAAGGATATTGAATTAAAGAACGATATGTTACTTAGATTAGCTAAATTGGATT
TCAACTTGCTCCAGATGCTTCACAAACAAGAACTTGTTGAAGTATCAACGTGGTGGAAAG
ATTTGGATTTTGTAACAACGCTTCCATATGCTAGAGATAGAGTAGTTGAATGTTATTTTT
GGACACTAGGAGTGTATTTTGAGCCTCAATATTCTGAAGCTCGCGTCATGCTTGCTAAGA
CCATAGCCATCATTTCTATTGTTGATGATACCTTTGATTCTTATGGTATAGTTAAAGAAC
TTAACACATACACAGACGCTATACAAAGGTATGAACTTCATAAATTTACTTCCTCGTTAT
ATAAAAAAACATAAATTTACTTTAGATTCGTCAACTTTGCAGATGGGATATAAGTGAAAT
TGATCATCTTCCTGATTACATGAAAATCAGTTATAAAGCTCTTCTTGATCTTTACAAAGA
TTATGAAAATGAATTGTCTAACGATGGAAGATCTCATGTTGTCTATCATGCAAAAGAAAG
AGTATGCGATCAAATTACATTTTTTCTTAACCCCTTAAACTTGAAGCAACGTATATTCAA
ATTACTATTTTCTAACAACTTTTTTGGTGTTGTAGATGAAAGAAATAGTGAGGAACTATA
ACGTCGAGGCTAAATGGTTTATTGAAGGATATATGCCTCCTGTTTCTGAGTATCTAAGCA
ATGCTTTAGCAACTAGTACTTATTACTTGCTCACAACAACAACATATTTGGGCATGAAAT
CTGCTACTGAGCATGATTTCGAATGGTTGTCAAGGAACCCTAAAATTCTTAAAGCTAATG
CAACATTATGTCGTGTTATTGATGACATAGCCACATACGAGGTATATATGAATTGACTGA
CACTGAGTTTAAGAAAGTAAAAAAGTGTTTTGAATTTTTGTGGTTACAAACTAAAGATAT
GCAAAATGTACCAAATTAAAAACGTCCTTCAATCTTGTACTGGTCTGAAACATGTCATGT
GGAAAGTTGAAATTAATGGGATATGATATTTGAGCAAACATCAACGTGTTGCAACGACTA
TATATTGAAGCAATATATAAAATTTAACCCCTTATAATCTATTTGCATTTCCAAGTTGAG
AAAAGTAGGGGACAAATTGCAACAGGAATTGAGTGTTACAGGAGAGATTATGGCGTATCA
ACTGAAGAAGCAATGGTTAAATTTAACGAAATGGCTGAGATAGCATGGAAGGATGTTAAC
AAAGGAATTCTTAGGCCGAATCATGTATCCATGGAGTTTTTAATGCGTATTCTCAATCTT
GCTCGTCTTATTGACGTTACATACAAACACAATGAAGATGGATACACATATCCGGAGAAG
GTCTTAAAGCCTCACATTGTTGCCCTACTTGTAGACTCCATCAAAATTTGATGAGCTACC
ATATGTTGTTATTTTTAGCATGTTGAATAAAGTTGTTAGGGAGCTTCTTTAGCAGTTGTT
TTGTGCACTTCTTAACTAGGACTTCAACTAAAACCCTTTGTAAGATGATGCATAACTATT
TTACTATTTATATAGGAC
