Microarray Probes on PGSC0003DMT400084506
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41038_PI426222305 |
JHI_St_60k_v1 |
CCGAGCCCGAAGGCCCGGAATTTGATTATTGGTGAGCTGTTTAGGACTGTTTTTATTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400084506
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400084506 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23340.1 |
+1 |
3e-46 |
155 |
85/145 (59%) |
DREB and EAR motif protein 3 | chr2:9938186-9938716 FORWARD LENGTH=176 |
Transcript Sequence (805 bp)
>PGSC0003DMT400084506 805 pgsc_dm_v3.4
GGCAATTTCCCTTAAAAATAAAATCAACGTGGAAAACCATAGTACCCAAATTGTGGCCAA
CGCCCATTTCTCTTTCATGGGCATTCCTCTAGATTACAGGGAAATTTTTTGTTCCAATTA
ACCCCAAAAATTGATAAGGAAAGAGGAAAAATGGAGGTTGACGGCGTCAGAAGCGGCGAT
GCTGGGGTGGTTGGAGGCGGAGGAGGAGGAGGAGGAGGGTGTTGCTCCGGGAAGAGAAAA
AACGAGAGGGCTTACAAAGGAATAAGGATGAGAAAATGGGGGAAATGGGTTGCTGAAATC
CGAGAGCCAAATAAACGGTCGAGGATATGGTTGGGCTCGTATACGACGCCTGTTGCAGCT
GCAAGAGCATACGATACAGCTGTTTACTATCTCCGGGGGCCATCGGCCCGGTTAAATTTC
CCGGAGCTGTTAGTCGGTGATAGCGGCGAACTCAGTGATTTGTCTGCTGATGCAATTCGT
AAGAAGGCTGTTGAAGTAGGTGCTAGAGTTGACGCTATCCAGAGTTCAATGGCTATTTCC
GATGATGACGGCGACGGCGATAATCAGCTACGGCGACATGAAAGCCCGGCCCGATTAAAG
CCTTGTTGGTTTCAGGAAAAGCCTGATTTAAACTTGAAGCCCGAGCCCGAAGGCCCGGAA
TTTGATTATTGGTGAGCTGTTTAGGACTGTTTTTATTTTTCTGAATTATTATCTTTTTTC
TTTTTTTTAATTTAAATTTTGAGCTTAATATAATCTGAGTACAACTGTACTTATGTTGTA
ACATGTAAATATAGTCTTTGTCAAA
