Microarray Probes on PGSC0003DMT400083793
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24084_PI426222305 |
JHI_St_60k_v1 |
CTATCAATACAGTATGTGTAATATAGCTCTGATCGATGTTACTTTGGTTTAATTCGGGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083793
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083793 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09530.1 |
+2 |
1e-11 |
66 |
62/145 (43%) |
hydroxyproline-rich glycoprotein family protein | chr5:2960080-2961192 REVERSE LENGTH=370 |
Transcript Sequence (1608 bp)
>PGSC0003DMT400083793 1608 pgsc_dm_v3.4
CTTGAAGCCAATGACACATCCACTCTTATAAACATTATTCTTTCTTATAGCTTCTACCAT
CTGCAGAAAAATGGCTCAACATTACCACATATCATCTCTCTTACTGCTTACATTTCTCAA
TATATTCTTCATTCATGGCAACATAAGTGGCGCGACTGCACGCCACCTCCTTGAGACACC
CGTTCCTGAGATACCTAAACCAGAACTCCCAAAAGTTCCAGCCTTGCCAAAGCTTGAAAT
CCCAACTGTGCCGAAGCCTCAGCTTCCAACCATACCAAAGCCTCAGCTACCAACTCTACC
GAAGCCCCAGTTACCAACTTTGCCAAAGCCTAAGATGCCTGAGATCCCTACTATGCCAAA
ACCTGAGCTTCCTACTATGCCAAAGCCCGAGATTCCTTCAATGCCAAAGCTAGAGTTTCC
TCCCTTGAAAAAGCCAGAAATCCCACCAGTGCCTAAGACTGAGGTTCCTCCGGCTATGAA
AAAGCCTGAAGTTCCAACTCTACCAAAGCCTGAGCTACCGAGTCTGCCAAAGCCAGAAAT
TCCACAACTACCAAAGCCAAAAGTCCCAGAACTTTCAAAGCCAGAAGTCCCAACTATGCC
AAAACCGGAAATCCCAGAACTACCAAAGCCAAAAGTCCCTGAGCATCCAAAGTTAAATAT
CCCAACAACGCCAAAGCCTGAAATCCCAGAACCAAAAGTCCCAGAGCTTCCAAAGCCTGA
AATACCAACTACGCCAAAGCCTGAAATACCAGAATTACCAAAGACAAAAGTTCCAGAACT
TCCAAAGCCAGAAATCCCAGAATTACCAAAGCCAAAAGCCCCAGAGCTTCCAAAGCTAAA
AGTCCCAACAATGCCAAAGCCTGAAATCCCAGAACTTCCAAAGCCAAAAGTTCCAGAGCT
TCTAAAACCTGAAGTACCAACTATGCCAAAGCCTGAAATTCCGGAACTACCAAAGCCAAG
AGTCCCAGAACTTCCAAAGCCTGAAGTACCAACTACGCCAAAGCCTGAAACCCCTGAACT
ACCACAGCCAAAAGCCCCAGAGCTTCCAAAGCTAAAAATTCCAACAATGCCAAAGCCTGA
AATCCCAGAACTGCCAAAGCCTAAAGTCCCAGAGCTTCCAAAGCCTGAAATCCCAAAACT
TCCTAAGCCAGAAGTACCAACTATGCCCAAACTTGAAATCCCAGAACTACCAAAGCCAAA
AATCCCAGAGCTTCCAAAACTAAAAGTCCCAACTATGCCAAAGCCTGAAATTCCAGAACT
TCCTAAACCAACTCTTCCTTCACTTTCTCCACCATACAAACCCGCTACTCCTTGAGTAAA
TTATATGCTACTTTCACTCTATTAGGAAGTACCCAACTAATATTTTGCGATTTCCATCTT
AGTCTATGAAGCTTGCGACCTGAGCTGTGACATGGAGATAGTATTGGATACTTTCTGCTA
GGAGTAGAAATTGTAATTCTTTTTTAGTAGTATTTGAATTGAATGTACCATGTTTGATGT
GTCGTTATATTACGAGTATTTTATTACTTTCTATCAATACAGTATGTGTAATATAGCTCT
GATCGATGTTACTTTGGTTTAATTCGGGCTAATATTTCAAAAGGTCAG
