Microarray Probes on PGSC0003DMT400083729
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23893_PI426222305 |
JHI_St_60k_v1 |
AACTCTATTTTGGTTAACACTGGCGATCACCTCGAGATAAGTGTATATATACATGTCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083729
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083729 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G10490.1 |
+3 |
2e-40 |
150 |
72/146 (49%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr4:6483900-6485179 FORWARD LENGTH=348 |
Transcript Sequence (1649 bp)
>PGSC0003DMT400083729 1649 pgsc_dm_v3.4
ATAAGTGTATATATACATGTCAAGGCCATTGCCATTATTCCTCAACACACATTCAAAAAA
TAAGGTTGCTAGCTACTTATAACATTATGAGAAGCGTGAAATTAGTATCTGAGTTGCCCA
ATTTAAAAGCAGTACCTTGTAATTACTATGTTGATAATCATCATAAATATTCATCACCAG
CCATTATTGACACTAATCATGATGATTCATTAATCCCCATCATTGATTTTTCCCTCCTTT
CCTCAAAAGACCCTCATCAACACTCCAAAGTCATTCAACAACTTGGAAGAGCTTGTCAAC
AATGGGGATTTTTCATGGTTGTGAACCATGGAATAGAAGAAAGTTTGATGAAGGAGTTGA
TTGGGGTGATAAAAGAATTCTTCTTAATGGGAGAGGAGGACAAATGGAGGTACAAAGGGG
AAAAAATGTTTGATCCAATAAAGTATGGAACTAGCTTTAATTATACTTCTAAGGACATCA
CTACTTATTGGAGAGATTACCTTAAACTCTCTCTTCATCCTCAACTTCATTGCCCCGACC
AACCCAATAATTTCAGGTATTTTCTGTCTCTCAATTTGTGTGCTTTTTAACTAATATTTT
AAACTATATAACTTTTTATGATATTAATATGAGATAAATTGCAACTTATTAGTATCTTTT
TCGTATAGTCTTTTGTCAATTTAAATTTGTGAAAGACAATAACAACCGGAAGAATCTTCC
TATGAACTTTGAAAAATCCACATTTTGATATGTGACATGAAACAATCAATGGGTCACTCT
TGTCGGAGTTGGGCCTGTGCGATTGCGACAATTTTATTGGTTCCGAAATCTTCATTAAGC
TAGCTGCTCTTTCAAAAATATTTATATTGGACATATCATAACTTTATATTTTATGTTGTA
TGGTTTAATTTAACAGAGAAGTTTTAGGTGAGTATGGTGAAAAATCGAGAAAAGTGGCAA
GAAAGTTACTATCAGGAATATCAGAAAGCTTAGGATTGGAAGAAGAGTTGATGAACAAAT
CCCTGAATCTGGACTCGGGTTACGAGGTGTTTGTTGCAAATTATTATCCAGCTTGTCCAC
AGCCCGAACTTGTAATGGGCCTTCCACCCCATTCAGATTTTGGCCTTTTAACTTTTCTAA
TACAAAATGATGTTGGAGGATTACAAATACAACACAATGGAAAATGGATCAATATCAATC
CCATTCCCAACTCTATTTTGGTTAACACTGGCGATCACCTCGAGATATTTACGAATGGGA
AGTACAAGAGTGTTTTGCACAGAGCGGTAGTGAACAAAATGGAAAGGATATCAATAGGAA
TTGCAAATTGCCCAGCTATGAATGCCACAGTGAGTCCAGCTGCTTCACCTCTAATCCAAA
ATGAAAGGTTTCCACCACTCTATCTACCCAAGAAATACAGTGAATATGTGGAGATACAGC
AGACAAATCCACTTGATGGAAAGTCATGTTTGGACAGAATCAAGATTAATTCACTACCAT
TGAAGTAAAAAGAAAAAAAAAAAAAAGGACTTTATTTCATTTTGTTTCAGTCGACTTGTC
TCAAGAAATATGTACTCTCTTTTTAAATGTATTCATAATTAAATACCAATTTAGCAATAA
AAATAAAAAAAAATAAAAAACGATTGAGG
