Microarray Probes on PGSC0003DMT400083215
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3282_PI426222305 |
JHI_St_60k_v1 |
GGAGTACTAGTTTATTGTGAGATAGTGTTTCTTGACTCACTTTTTGAGTTGTGAGAAAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400083215
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400083215 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G03230.1 |
+1 |
6e-95 |
299 |
169/406 (42%) |
Eukaryotic aspartyl protease family protein | chr1:790110-791414 FORWARD LENGTH=434 |
Transcript Sequence (1614 bp)
>PGSC0003DMT400083215 1614 pgsc_dm_v3.4
TCCACACCTACTGTGGCGCCTCTCCGCAGCATCAGCCAAAACTGCACATGTTTTTATAGG
GTTTTTCTCTACACACTGTTTGTTCAAACTAAAAAAAAAATGGCTTCACTTGTTCAATTC
CTTCCTCTCTTCCCTTTCTTTTTCTTGATTTCTTTCTCTGTTTCTCATGGACCCTTTTTA
CCAAAAGCCATTATTCTCCCTGTAAACAAAGATCCATCTACTTTTCAATATGTTACTCAA
CTCTACATGGGTGCTAATCATCTTGCTCCCATCAAATTAGTTGTAAATCTTGGAGGTTCA
TTTCTATGGGCTGACTGTGGCTTGACTTCTGATTCTTCAAGTCAAAAACTTGTACCTTGT
AATTCACTCAAATGCTCCATGGCAAAGCCTAATGGTTGTACTAATGACAACAAGATCTGT
GGTTTGAAATCAGAAAACCCCTTTACAAGATTAGCTGCAACAGGGGAATTAGCAGAGGAT
ATGTTTGCTGTGGAGTTTATAGATGAGTTGAAAACAGGTTCAGTAGCTTCAATTCATCAA
TTCTTGTTTTCTTGTACATCATCTACTCTGTTACAAGGACTTGCTAGAGGTGCTAAAGGT
ATGTTAGGGCTTGGAAATTCAAGAATTGCATTGCCATCTCAGTTGTCTGATACATTTGGT
TTTCAAAGGAAATTTGCTATTTGTTTGTCTTCTTCAAATGGTGCTATAATTTCTGGTGAA
AGTCCTTATTTGTCACTTTTGAGTCATGATGTTTCAAGATCCATGCTTTATACACCTCTA
ATTTCATCTAGAGATGGGGTTTTAGAAGAGTATTACATAAATGTCAAATCCCTCAAAATT
AATGGAAATAAACTATCTTTGAACACATCTTTGCTTACAATGGATGGAGAAGGTCATGGA
GGGACAAAGATTAGTACAATTTCCCCTTTTACAACTATGAAGACCTCAATTTACAAGACA
TTTGTGGAATCTTATGAAAGATTTGGTTTTTCCATGGGATTGACTAAGGTAGAACCTATA
GCACCATTTGGGCTTTGCTTTAGCACAAAAGTAGAGGGGCTAAATGTGCCAAGTATTGAT
CTTGTGTTGCAAAGTGAGATGGTTAAGTGGAGGATTTATGAGAGTAATTCAATGGTGAAA
GTAAGTGATGAGGTGATGTGTTTGGGATTCTTGGATGGAGGGGTTAACCAAAAGGCATCA
ATTGTTATAGGGGGTCACCAGTTGGAGGATAATCTTTTGGAGTTTAATTTGGGAACTTCT
ATGCTTGGATTTACTTCTTCATTGGCAATGGTGGAAACAAGTTGTTCTGACTTCATGTTC
ACAAAGGATTCTTCAGTTTTTGATACTTGACATGAATCCTTAACCAAAGATAGACAATTC
CCCTTTGTATAGTTATGTTAAGAACATGTATTGGCTCTTATAGATAGTCATAACTTGGCC
AATCTTAGAATATTAGAGGAGTACTAGTTTATTGTGAGATAGTGTTTCTTGACTCACTTT
TTGAGTTGTGAGAAAGTTTTGATATGTAAGAACTGATTTTTACTATGTTCTTATTCTAAT
TTTCACTATGTTCCTTTGCTATTAATTTGATGTATTGTTTTGTAGTACTCCATC
