Microarray Probes on PGSC0003DMT400082790
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50959_PI426222305 |
JHI_St_60k_v1 |
GAAAGAGAGGTGGGGAATGACGAGCTATGGACTTCAATTTTATTATTGTGTTTTTATAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400082790
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400082790 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15270.1 |
+1 |
9e-11 |
59 |
26/28 (93%) |
squamosa promoter binding protein-like 5 | chr3:5140624-5141256 REVERSE LENGTH=181 |
Transcript Sequence (744 bp)
>PGSC0003DMT400082790 744 pgsc_dm_v3.4
TTGGGCCCGACATATAGTAGTAGAACCAGGTGAACCAGACGTACTATTTCTTCAAACCTT
TTGTGAAATGTGAACTTTGTTTGGTCATATTAAAGTTGAACACATAGTACTCTGTACTAG
CTATTGTTCTGTTTTTGGTTAATAAAATTAATTCTACGCAGATTTCATGAGCTAACGGAA
TTTGATGAATCGAAAAGGAGTTGCCGGAGACGTTTGGCTGGACACAACGAAAGGCGAAGA
AAGAGTACATCGTCGTCATCGTCTTCATCATCTACAGATCAGTCTCATAGAATTCATATA
TCTATCCAAGAAAATTCAACTCACAAAAACATCCATCTACGTTGAAAAAATGCATATTTG
ATATAATAATTTGCTCTCTCTCTTCTGTCATAAATCTGTTTCTAAAATAATAATCATCAT
TCACATACCATCCCGTGATAATTCAGTACAATAAAGTACTTTCGAACTTGTTGCAGTACG
TACTGTACTTGTAGTAGGACAGAGGATTTATTGCGATCGCGATACACTGTGTGAAGTTAT
AGTATATATAAATGTTATGCAAGGAAAGAGAGGTGGGGAATGACGAGCTATGGACTTCAA
TTTTATTATTGTGTTTTTATAGATGTATTGTAAGAAGTTTTAAGAAGATATGCTCCTATA
ATTGTTAAGTTAATTTGAGTTTGTAAGTTTTATGGGAGTAATATGTATCCTATTAATACA
TTAATCATATATAACTATATGGAC
