Microarray Probes on PGSC0003DMT400082388
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31718_PI426222305 |
JHI_St_60k_v1 |
GAACTTACTAATAAACTTCATACTGAAGGTGTTGTCATTCATTGGCATGGGATTCGACAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400082388
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400082388 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G21105.1 |
+3 |
0.0 |
768 |
368/549 (67%) |
Plant L-ascorbate oxidase | chr5:7172727-7177409 FORWARD LENGTH=588 |
Transcript Sequence (1983 bp)
>PGSC0003DMT400082388 1983 pgsc_dm_v3.4
AAAGCTCCATTAGTGTGAGCTTTGTATATACAAAAAACTTCTCTTTCTTTTTAATTATAC
AAATCAATATGTCTTCCTCAAGATTATTGTTATTATTGTTGGTGTCATTTATGTTGGTTG
GACATTCATTAGCAAAAACAAGGCATTTTAAATGGGAAGTTGGGTATATTCATTGGTCAA
CAGATGGTGAAGAAAGTGTTGTGATGGGAATAAATGGTGCATTTCCGGGTCCAACAATTA
GGGGGCGAGCTGGGGACATAATTGTTGTTGAACTTACTAATAAACTTCATACTGAAGGTG
TTGTCATTCATTGGCATGGGATTCGACAGTTTGGAACACCATGGGCTGATGGAACTGCAG
CAATATCTCAGTGTGCCATTAATGCTGGAGAGACATTTGTCTATAGGTTTAAAGTTGATA
AGGCCGGGACATATTTCTATCATGGACACTATGGTATGCAAAGATCAGCAGGGCTATATG
GTTCACTCATAGTGGATGTTGCACAAGGTGAAAGAGAACCATTCCATTATGATGGAGAAT
TCAATTTATTGTTAAGTGATTGGTGGCACAAAGGTTCACATGAACAAGAAGTTGACTTAT
CTTCCAATCCTCTTCGTTGGATTGGTGAACCTCAGACATTGTTGATAAATGGGAGAGGTC
AATACAATTGTTCAATGGCGGCGCAATTTAGCAACCCACGGCTTCCACAGTGCAAGTTAA
GAGGGGGTGAGCAGTACGCACCTCAGATTCTCCGCGTGCGTCCCAACAAGACATACAGGC
TTAGGTTAGCCAGTACCACTGCATTGGCTTCACTCAACTTGGCAATTGGGGGTCACAAGA
TGGTGGTGGTAGAGGCAGATGGAAACTATGTTCAACCATTTTCAGTACAAGACATAGACA
TTTATTCAGGTGAAAGCTATTCAATTCTTTTCACCACAGATCAAGACCCTTCCAAAAACT
ATTGGATTTCAACAAGTGTAAGAGGAAGAGAACCAAAAACACCTCAAGCCCTCACTCTAT
TGAACTACCTCCCAAACTCAGCATCCAAAGTCCCAACATTACCACCACCTATTGCACCCC
TTTGGAATGATTATAACCATAGTAAGTCATTTTCTAACAAAATTCTTGCCCTAATGGGAT
CACCTAAGCCACCAATTAAAAACAATCGTCGTATTATTTTACTCAATACTCAGAATAAAA
TCGATGGTTACACAAAATGGGCTATTAATAACGTGTCATTAGTCTTACCAACGACTCCCT
ACTTAGGGTCTATTCGATATGGAATAAACAATGCTTTCGATACTAGACCTCCACCGGATA
ATTTCCCTATAGACTATGATGTTATGAAACAAGCACCAAATTCTAATGCTACATATGGTA
ATGGTGTGTATATGCTAAAGATGAATAATACAATTGACATTATACTACAAAATGCCAATG
CCTTAGGTAAAGGTGCAAGTGAAATTCATCCATGGCATTTACATGGACATGATTTTTGGG
TTTTGGGATATGGTGAAGGGAAGTTTAGTGAAAAACATGTGAAGAAGTTCAATTTAAAGA
ATCCACCATTGAGAAATACTGTTGTGATTTATCCCTATGGATGGACAGCACTAAGATTTG
TGACTGATAATCCTGGAGTTTGGGCTTTTCATTGTCACATTGAGCCTCATTTGCATATGG
GAATGGGAGTAATATTGGCTGAGGGTGTTCATCTTGTCAAGAATATACCTAGAGAAGCTT
TGGCTTGTGGTTTGACAGGGAAAATGCTTATGACTAACAAGCATAATTAAATATTGTTGA
ATTGAAAATTGGTTCTTGATGAACTTAAGATAAGAGGGGTTTTTCTTTCTTTTCTTATTT
AGTTTCATATATATAATGATTTTTGTAATTTATTTTGAGTGTGACTTGGAGGTGAGGTAA
TATTAAAATGTATGTTATTAAGAGGTCAAGGGCCTAAATGTTGTTGGGAATGTATTAACT
TGT
