Microarray Probes on PGSC0003DMT400081439
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38057_PI426222305 |
JHI_St_60k_v1 |
TCTGTTTTTTGAATAGCTATGGTAGTTGGGGCCATTTGGTCACGAAATAAACTGTTTTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081439
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081439 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G02370.1 |
+1 |
3e-37 |
134 |
76/129 (59%) |
Protein of unknown function, DUF538 | chr4:1042458-1042961 FORWARD LENGTH=167 |
Transcript Sequence (1160 bp)
>PGSC0003DMT400081439 1160 pgsc_dm_v3.4
AATAAGACATGGTAGCTAGTCCAACTCAAATCGTAAAAAGTTGAGGGACTTGTATTTTGA
ATCGCTCCCGAAAAGGAATCTATTGGTATGTGCCTTGATTTATTTCATGGATAAGGGCTT
TGGTTCAAGTCTAAGATGGCCCAGCCGTGTCAGGAAAGATAATAGAAGAAACATCCGACT
ACTTCGAGTCGTTGCCATGTGAGTTAAGTTCAATGTTTGAATGGAGAATACGGAAGCTAG
TCCATCATCTCCGAGTTTTGGATGTTGGGTTGGGCCAAAGAGTTCTCTAGATGGATTTAT
CGTATTTTTTTTTATAATCATGGTGTTCGATTCAGTTTACGTGTATTGAATCAACTACCA
ATCCAATGGACTATTTTGCTGTACAAATTATTGTAAGGACACGTGGACAACAAAACAGAG
CAACAAACAAGTTTGTCATCATACCTATAAAACAAACATCTGTCAACCTCATATCTTACC
ATATTATGTATTCACCCTTATAAAACGGTGAACTTTGGAACAACCAAACAATCAATGTTC
ACAGAAATGTCAATATCTTTAATAAGAAGTATTTTTTACCTCTTTCTCTTCTTTTTTGCC
ACTGCAGCTTCAAGGAATGAGAAGCTATCAGCTTACGAAGAGCTACAGCGTTATGATTTC
CCAATGGGGATTCTTCCAAAAGGAGTAAAAGACTACAAATTGAACACAAAAACAGGTGAA
TTCTCAGCTTATCTTAATTCTACCTGCAGCTTCAAATTGGAGAACTCATATCAACTGAAT
TACAAGCCTGTTATAAAAGGGGTTATATCTAAAGGCAGGCTTAAGAAATTGAGTGGTGTT
AGTGTTAAGGTGGTGTTGCTATGGCTTAACATTGTCGAAGTTGAGAGAAAAGGTAAGAAT
CTTGAGTTCTCAGTTGGACTCGCTTCGGCAAATTTCCCGGTTGAGAACTTTGAGGAATGT
CCACAGTGTGGGCATGGATGGAATTGTGTTGATGAGGTAACAATCTTGTGTCTTCTTTCT
AGACTAGATTAGGTACTTTGATTGAAAATCTAGTTATGTTTTTTGTTTTCTGGTAGTGGA
AATGATCTGTTTTTTGAATAGCTATGGTAGTTGGGGCCATTTGGTCACGAAATAAACTGT
TTTTTTTTTTTCATTTTTTA
