Microarray Probes on PGSC0003DMT400081432
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38031_PI426222305 |
JHI_St_60k_v1 |
AAGCCACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTTGATTCGAGATAAGCTCAACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081432
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081432 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32150.1 |
+2 |
5e-84 |
266 |
131/196 (67%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:13659095-13660531 FORWARD LENGTH=263 |
Transcript Sequence (1780 bp)
>PGSC0003DMT400081432 1780 pgsc_dm_v3.4
AATATTTTGAAATAATTTTTGTTTAGATTTGGATGATACTCTGTATTCGTCTAAGACTGG
AATTGGACAATCCTTGAAGAAGAACATTGACGATTTTCTGGTGGAGAAATGCGGTTTTCC
GGTGTCGAAAGCATCGGCTTTGCGTGTTGAGCTTTTCAAAACTTACGGCAGTTCTCTTGC
CGGATTACGAGCTATAGGCTATGATGTTGATGCCGATGATTATCACAGCTATGTGCACGG
AAGATTACCGTATGATTTGATTAAACCGGATCCCCAATTACGAAGCATCTTGCGTCGTAT
TAATCAAAGGAAAATTATTTTTACGAATTCGGATCGAATTCATGCGATGAAGGCTTTGGA
TCGTCTTGGAATTACGGATTGTTTTGAACAGATCATTTGTTTCGAGACGATGAATTTTAA
CCTCTCTAAGGCAACAAGGCCGGAAGAGATTCCGGTGATATTGAAGCCTTCAATGGAGGC
AATGAACATCGCCATTGAAGCTGCTCAGGTCGATCCTTATCGCACGCTCTTCCTTGATGA
TAATGTTAAGAACATAGCTGCTGGAAAAGCTGTGGGGCTTCAAACAGTTTTGGTAAGTTC
TTATTTGTATATTTGTGTGTTCACAATTTGCTTTTGAGATGAGATGATCACGTGAATAAT
TAGATTGAGAAGCTAATGTAGACTGAAAAATACTCATTAAAACTTTATTCCTACCCCTAA
GAAGATATGGGTAATATTTAGTGGAGCACGTTAAATTTCCTATTTTATATAAAAATAAGG
TACAAGAAGATATTTCAGCTTGTGGTTATCTTAAATTGTACTATGTGACCTTATTGTCCT
GCTATTCAGTAATCAAAGTTAGGTTACAACCAATATGTGTTGTGGATCACTGGTGGGAGT
GTTTTACCCTTAATCAAAGGTCTCGGGTTTGAACCCTGGGTATGGAGAAAATCTTGTTGG
GAGCACTACTCCCGAATGGGCTTTGTAGTGCGCGATCCGAATTTAGTCGGGGCTCCAATG
TGGGCTCCGAACACTGGATGGGAAACCAAGAAAAAAGTTTATAGCACCAAGAAAATGACT
TTATTTTGGACCAAAGTGTTTTTCCCCTTTGTACAAACTCGACTTGTCCAGTTCAAAACG
TGGGTTATTGAAAATGAAAAAAGTTCTACAAGTGTAATGGTCCTTTGACATATGATGGAT
ATTTTAGCTAGTGCTTATCACAAAGTTCTACCTGTTTCTCTTATCTACATCAATTAAATA
TCTATCTCATTTGAAGATGTGAAAATTTTAAATATCCTCTTACAGAAATATAGGATAAGA
CTACGTACAATAAACTCTGATTTACGTGTTTATTTCCGTATATTGAAGGTTGGAAGATCG
ACCAAGACGAAAGAAGCTGACTATGCATTAGAGATAGTGACTGATTTGGTTCAAGTAGTA
CCAGCAATATGGTTCAAGGAAGAAGAAAAAGATCAAAAAATAACACGTACAAGAAGTGAA
ATGGACTTTGTTACAACCACAGCTGTGGGTGCTTAATCTATGTCAAGAAAAAACCAAAAT
AACAAGAATCTTCTAATCCATGTACAAGTGTACATATTCTTAAAATAATTGTCTTTAATG
TATGTGAATGTACTTGTTATGTATATATATAAATCATGAATAAATTAACAAAAGAAAAGC
CACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTTGATTCGAGATAAGCTCAACAAATTT
TAAATTTGAAAAATAGTTTTAATATATTCCTCAAGCCTTC
