Microarray Probes on PGSC0003DMT400081431
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37974_PI426222305 |
JHI_St_60k_v1 |
AAGCCACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTTGATTCGAGATAAGCTCAACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081431
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081431 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32150.1 |
+2 |
3e-80 |
257 |
126/187 (67%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:13659095-13660531 FORWARD LENGTH=263 |
Transcript Sequence (1861 bp)
>PGSC0003DMT400081431 1861 pgsc_dm_v3.4
CTTGTGTCTACTCATCATTTCACAAAAAAATATTTGCATTTATAATTTGCTCAATTTGTT
TTTCTCTACTATGGATTCTTCCTCCCCTTTTGACTCTATTATTTTTGATTTGGATGATAC
TCTGTATTCGTCTAAGACTGGAATTGGACAATCCTTGAAGAAGAACATTGACGATTTTCT
GGTGGAGAAATGCGGTTTTCCGGTGTCGAAAGCATCGGCTTTGCGTGTTGAGCTTTTCAA
AACTTACGGCAGTTCTCTTGCCGGATTACGAGCTATAGGCTATGATGTTGATGCCGATGA
TTATCACAGCTATGTGCACGGAAGATTACCGTATGATTTGATTAAACCGGATCCCCAATT
ACGAAGCATCTTGCGTCGTATTAATCAAAGGAAAATTATTTTTACGAATTCGGATCGAAT
TCATGCGATGAAGGCTTTGGATCGTCTTGGAATTACGGATTGTTTTGAACAGATCATTTG
TTTCGAGACGATGAATTTTAACCTCTCTAAGGCAACAAGGCCGGAAGAGATTCCGGTGAT
ATTGAAGCCTTCAATGGAGGCAATGAACATCGCCATTGAAGCTGCTCAGGTCGATCCTTA
TCGCACGCTCTTCCTTGATGATAATGTTAAGAACATAGCTGCTGGAAAAGCTGTGGGGCT
TCAAACAGTTTTGGTAAGTTCTTATTTGTATATTTGTGTGTTCACAATTTGCTTTTGAGA
TGAGATGATCACGTGAATAATTAGATTGAGAAGCTAATGTAGACTGAAAAATACTCATTA
AAACTTTATTCCTACCCCTAAGAAGATATGGGTAATATTTAGTGGAGCACGTTAAATTTC
CTATTTTATATAAAAATAAGGTACAAGAAGATATTTCAGCTTGTGGTTATCTTAAATTGT
ACTATGTGACCTTATTGTCCTGCTATTCAGTAATCAAAGTTAGGTTACAACCAATATGTG
TTGTGGATCACTGGTGGGAGTGTTTTACCCTTAATCAAAGGTCTCGGGTTTGAACCCTGG
GTATGGAGAAAATCTTGTTGGGAGCACTACTCCCGAATGGGCTTTGTAGTGCGCGATCCG
AATTTAGTCGGGGCTCCAATGTGGGCTCCGAACACTGGATGGGAAACCAAGAAAAAAGTT
TATAGCACCAAGAAAATGACTTTATTTTGGACCAAAGTGTTTTTCCCCTTTGTACAAACT
CGACTTGTCCAGTTCAAAACGTGGGTTATTGAAAATGAAAAAAGTTCTACAAGTGTAATG
GTCCTTTGACATATGATGGATATTTTAGCTAGTGCTTATCACAAAGTTCTACCTGTTTCT
CTTATCTACATCAATTAAATATCTATCTCATTTGAAGATGTGAAAATTTTAAATATCCTC
TTACAGAAATATAGGATAAGACTACGTACAATAAACTCTGATTTACGTGTTTATTTCCGT
ATATTGAAGGTTGGAAGATCGACCAAGACGAAAGAAGCTGACTATGCATTAGAGATAGTG
ACTGATTTGGTTCAAGTAGTACCAGCAATATGGTTCAAGGAAGAAGAAAAAGATCAAAAA
ATAACACGTACAAGAAGTGAAATGGACTTTGTTACAACCACAGCTGTGGGTGCTTAATCT
ATGTCAAGAAAAAACCAAAATAACAAGAATCTTCTAATCCATGTACAAGTGTACATATTC
TTAAAATAATTGTCTTTAATGTATGTGAATGTACTTGTTATGTATATATATAAATCATGA
ATAAATTAACAAAAGAAAAGCCACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTTGATT
CGAGATAAGCTCAACAAATTTTAAATTTGAAAAATAGTTTTAATATATTCCTCAAGCCTT
C
