Microarray Probes on PGSC0003DMT400081430
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38054_PI426222305 |
JHI_St_60k_v1 |
AAGCCACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTTGATTCGAGATAAGCTCAACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081430
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081430 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32150.1 |
+2 |
2e-98 |
296 |
150/248 (60%) |
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:13659095-13660531 FORWARD LENGTH=263 |
Transcript Sequence (1085 bp)
>PGSC0003DMT400081430 1085 pgsc_dm_v3.4
CTTGTGTCTACTCATCATTTCACAAAAAAATATTTGCATTTATAATTTGCTCAATTTGTT
TTTCTCTACTATGGATTCTTCCTCCCCTTTTGACTCTATTATTTTTGATTTGGATGATAC
TCTGTATTCGTCTAAGACTGGAATTGGACAATCCTTGAAGAAGAACATTGACGATTTTCT
GGTGGAGAAATGCGGTTTTCCGGTGTCGAAAGCATCGGCTTTGCGTGTTGAGCTTTTCAA
AACTTACGGCAGTTCTCTTGCCGGATTACGAGCTATAGGCTATGATGTTGATGCCGATGA
TTATCACAGCTATGTGCACGGAAGATTACCGTATGATTTGATTAAACCGGATCCCCAATT
ACGAAGCATCTTGCGTCGTATTAATCAAAGGAAAATTATTTTTACGAATTCGGATCGAAT
TCATGCGATGAAGGCTTTGGATCGTCTTGGAATTACGGATTGTTTTGAACAGATCATTTG
TTTCGAGACGATGAATTTTAACCTCTCTAAGGCAACAAGGCCGGAAGAGATTCCGGTGAT
ATTGAAGCCTTCAATGGAGGCAATGAACATCGCCATTGAAGCTGCTCAGGTCGATCCTTA
TCGCACGCTCTTCCTTGATGATAATGTTAAGAACATAGCTGCTGGAAAAGCTGTGGGGCT
TCAAACAGTTTTGGTTGGAAGATCGACCAAGACGAAAGAAGCTGACTATGCATTAGAGAT
AGTGACTGATTTGGTTCAAGTAGTACCAGCAATATGGTTCAAGGAAGAAGAAAAAGATCA
AAAAATAACACGTACAAGAAGTGAAATGGACTTTGTTACAACCACAGCTGTGGGTGCTTA
ATCTATGTCAAGAAAAAACCAAAATAACAAGAATCTTCTAATCCATGTACAAGTGTACAT
ATTCTTAAAATAATTGTCTTTAATGTATGTGAATGTACTTGTTATGTATATATATAAATC
ATGAATAAATTAACAAAAGAAAAGCCACGTGAAGGTGGTTTTTTCGAGAACTTTTGTGTT
GATTCGAGATAAGCTCAACAAATTTTAAATTTGAAAAATAGTTTTAATATATTCCTCAAG
CCTTC
