Microarray Probes on PGSC0003DMT400081399
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38027_PI426222305 |
JHI_St_60k_v1 |
GTAGGCTGGCTCTTTTTGTGAAGAAATGTGTCTTGCCTACTTAAAAAGATCATAATATCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400081399
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400081399 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G40940.1 |
+2 |
0.0 |
811 |
422/593 (71%) |
ethylene response sensor 1 | chr2:17084635-17086819 REVERSE LENGTH=613 |
Transcript Sequence (2681 bp)
>PGSC0003DMT400081399 2681 pgsc_dm_v3.4
CAACTAAAAGAAAATGGTTAACACACGTATGAAGTGCTTCACTGTAGCAGCGTGATTCCG
GTGAGGAGTTTAAGGCTTTTTTTTTTTTCCTCTTAATTACTTCCCTCCACTTTACTTCAC
TTTTAGTTGGGGGAGCTCTTCTCGATAATCGCCTAATTTCTATAAATTAAAATCAGTATA
TCATCGAAGAACACAACGAAAATCCGATGGGCACAAGCAAAACGACAGTTCAAATTCATG
AAAATGATAAAACGAAGTTACATGGAGTAGTAGTTCAGTGAAGTAGTAGAAACTGAGATC
GCATTCTCCATCTCCATTTTTCACATCTAAACAGTCGTGCAAAAAAATGAAAATTTGCTG
CGAGACAGGTATGTGTCGCAGCAGGAAATAGCATCTTAAAGGAAGGAAGGAAACTCGAAG
TTGCTGAAATTTTTTGGTAATAAGATTCTTTGGACGAAACGAGGTAATGGAATCCTGTGA
TTGCATTGAGGCTTTACTGCCAACTGGTGACCTGCTGGTTAAATACCAATACCTCTCAGA
TTTCTTCATTGCTGTAGCCTACTTTTCCATTCCATTGGAGCTTATTTATTTTGTCCACAA
ATCTGCATGCTTCCCATACAGATGGGTTCTCATGCAATTTGGCGCTTTTATTGTTCTCTG
TGGAGCAACACACTTTATTAGCTTGTGGACATTCTTTATGCACTCTAAGACGGTTGCTGT
GGTTATGACCATATCAAAAATGTTAACAGCTGCTGTGTCCTGTATCACAGCTTTGATGCT
TGTTCACATTATTCCTGATTTGCTAAGTGTTAAAACACGAGAGTTGTTCTTGAAAACTCG
AGCTGAAGAGCTTGACAAGGAAATGGGCCTAATAATAAGACAAGAAGAAACTGGCAGACA
TGTCAGGATGCTGACTCATGAGATAAGAAGCACACTCGACAGACACACAATCTTGAAGAC
TACTCTTGTGGAGCTAGGTAGGACCTTAGACCTGGCAGAATGTGCTTTGTGGATGCCATG
CCAAGGAGGCCTGACTTTGCAACTTTCCCATAATTTGAACAATCTAATACCTCTGGGATC
TACTGTACCAATTAATCTTCCTATTATCAATGAGATTTTTAGTAGCCCTGAAGCAATACA
GATTCCACATACGAATCCTTTGGCAAGGATGAGGAATACAGTTGGTAGATATATTCCACC
AGAAGTAGTTGCTGTTCGTGTACCTCTTTTACACCTCTCAAGTTTTACTAATGACTGGGC
TGAATTGTCTACTAGAAGTTATGCGGTGATGGTTCTGGTTCTCCCAATGAATGGCTTAAG
AAAGTGGCGTGAACATGAGTTAGAACTTGTGCAAGTTGTCGCAGATCAGGTTGCTGTCGC
TCTTTCACATGCTGCAATTTTAGAAGATTCCATGCGAGCCCATGATCAGCTCATGGAACA
GAATATTGCTTTGGATGTAGCTCGACAAGAAGCAGAGATGGCCATCCGTGCACGTAACGA
CTTCCTTGCTGTAATGAACCATGAAATGAGAACGCCTATGCATGCAGTTATTGCTCTGTG
CTCTCTGCTTTTAGAAACAGACTTAACTCCAGAGCAGAGGGTTATGATCGAGACCATATT
GAAGAGTAGCAATCTTCTTGCAACACTGATTAATGATGTTCTAGATCTTTCTAGACTTGA
AGATGGTATTCTTGAACTCGAAAATGGAACATTCAATCTTCATGGAATCTTAAGAGAGGC
CGTTAATTTGATAAAGCCAATTGCATCTTTGAAGAAATTATCTATAACTCTTGCTTTGGC
TCTGGATTTACCTATTCTTGCTGTGGGTGATGCAAAACGTCTTATCCAAATTCTCTTAAA
TGTGGCGGGAAATGCTGTGAAGTTCACTAAAGAAGGTCATATCTCAATTGAGGCTTCAGT
TGCCAAACCAGAGTATGTGAGAGATTGTCATCCTCCTGAAATGTTCCCTATGCCAAGTGA
TGGCCAGTTTTATTTGCGCGTCCAGGTTAGAGATACTGGGTGTGGCATTAGTCCACAAGA
TATACCACTAGTATTCACCAAATTTGCAGAGGCGCGACCTACGTCAAATCGAAGTACTGG
AGGGGAAGGTCTGGGGCTCGCCATTTGCAGACGATTTATTCAACTTATGAAAGGTAACAT
TTGGATTGAAAGTGAGGGCTCTGGAAAGGGAACCACTGTCACGTTTGTAGTGAAACTCGG
AATCTGCAACCATCCAAATGCATTGCCTCTGCTACCTGTGCCCCCCAGAGGCAGGTTGAA
CAAAGGTAGCGATGATCTGTTCAGGTATAAACAGTTCCGTGGAGATGATGGTGGGATATC
TGTGAACGCTCAACGCTATCAAAGAAGTCTGTAAATGACAAAGTGACTAGTGAATTTGAG
ATTTCTTCACTGTTTTGACGCTCCAATGACAGTTTCTTGTAACTAAATTAATTCAATGCT
CGTAAAGAGAGTATTGAAAATTCCAGCATCGTGAAAATGTAACTCTCGAATTTATACATC
GAGCTTCAGACAACAATATGTTAGGCCTACAATGCTCTAAGGAGCACTACTGGAGTTTGC
TCCGTAGGCTGGCTCTTTTTGTGAAGAAATGTGTCTTGCCTACTTAAAAAGATCATAATA
TCATATGATTTGAAAAACTTTTTGAAATAATTGTCTTTAAA
