Microarray Probes on PGSC0003DMT400080660
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50839_PI426222305 |
JHI_St_60k_v1 |
CCTATTTGGCTTCCCTCTATTTCGTCAAGTATACTAAGCTAGTTTTGATCATAGATTTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400080660
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400080660 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G22600.1 |
+3 |
2e-45 |
166 |
118/354 (33%) |
Late embryogenesis abundant protein (LEA) family protein | chr1:7987308-7989187 REVERSE LENGTH=385 |
Transcript Sequence (1562 bp)
>PGSC0003DMT400080660 1562 pgsc_dm_v3.4
TCCTATTTCATCTCACTATCTTCCATTCCTTATACAACAAAACACTTGTTTTTTTTTTGT
CTTTCCTTGCACATAAATAATAAAGGATGATGAATGTTTTGGCTATTTCTCTTGTATTAT
CCACACTGGTTACAGCTGGATTTCTCACTCCCAATAAAAAAGAAGATGTTGTTTTAGTTG
TTGAATTTGATCAAAATGAAGGTACCAAAGTTTTAATCTCCCCACAACAAGCTCAAATTC
CAAATCAGAATTCAAAATCAAGTTATGTTTCTGATTTGAAAGATAAATTATATGAAAAAG
CAGAGGAAGCAACCTCTGTTCTTCCAAATATAGGTCAAGGGATTTCCAGTCCTTATGTGA
ATCAACATCAACAAAATAGTGCTAAAGATGTTGTTTGTGATGCATTTGGTAAGTGTAAAG
AGAAAATTACTACTGTTTTTGGTAAAACCAAAGATAAGGTTGAAGAAGGTGTTACCGAAG
CTTCAGAGAAAGTTAAAGAAAAAGCGAAGGATGTAGTTGATAAAACGAAGAGTAAAAAGG
ATGAAGTGGAACAAAAGGTGGAGCAAGTAAAAGGAGAAATATCTGAGAAAGCAGAAGAAG
GGAAAAAGGATTTGAAAGATATTATCGTGCGAGGACGTGATGTATTTACTTATATATTCT
CCTTAGGGAATTTGCGTCATGTGATGCGTTTGATGCATTTGTTGGGGTTTGCTGTGGCTT
ATGGGATGTGCATTTGGGTTACATTTGTTTCGAGTTATGTGTTGGCTAGAGCATTGCCAA
GGCAGCAATTTGCAGTTGTTCAAAGTAAGATTTACCCTGTTTACTTTAAAGCAATGGCTT
ATTGCGTTGGCCCGGCGTTCATCGGTCATTTTTTAAGCCAAAAACGTTGGTTTTACGCTA
ACTTGGGTGAAGCGGTTCAAGGTTTTAATCTTCTAGCTTCAATCTCCATGCTTTTGGTTA
ATTTGCTATACTTGGAGCCTCGCGCAACGAAGGTTATGTTTGAGAGATTGAAGTTGGAGA
AGGAAGAAGGTAGAGGTAGACACATATTCAACGTCGAACCAAGCAGTACTAGAGGAGTGG
AGTCGGTATTGGATCCAACAAAGACGACAACAACTAAACCAGCAGAAAAATCTCCAGAGC
AGTCCGCAGCAGAGGTAGTGAAGCCCCAAGTGGTGAAATTGAGCCAGAAGCTTAAGAAGT
TAAACTCGTATTCATCTTTTCTTAATGTGCTCACACTTATGGCTCTTACACACCATCTTG
TTCACCTTACTCAGCTACTCAATGCCGCCACCTGAATCCGGTGATCGATCACCTACCTAC
TCTATACTCTGTTATCTTTTGTTATTTTGGTTGAGGTGATTGCCACTCTGTAGATCCATC
AGCTAAGCTAGACCTCTTCTAATCTCGTCCTCTCAACTTTTGTCTAACTGTACTCCTATT
TGGCTTCCCTCTATTTCGTCAAGTATACTAAGCTAGTTTTGATCATAGATTTTCATATAT
TTTCCCCAAATGTTATTTGGGGGGAAATTTCATCATGTTTGGTCACTATATTTGGAAATA
TA
