Microarray Probes on PGSC0003DMT400079783
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40960_PI426222305 |
JHI_St_60k_v1 |
CGATACCTTTGATTCTTATGGTTTAGTTAAAGAACTTAACACATACACAGACGCCATACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079783
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079783 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G23960.1 |
+1 |
1e-84 |
275 |
158/430 (37%) |
terpene synthase 21 | chr5:8092969-8095128 FORWARD LENGTH=547 |
Transcript Sequence (1557 bp)
>PGSC0003DMT400079783 1557 pgsc_dm_v3.4
ATGTTGTTAGCTATTACTGGAAGGAAATTGGTTGAGAAATTGAATGTTATTGATGTTATT
GAACGTCTTGGCATCGCGTACCACTATGAGAAAGAAATCGATGATATTCTGTATGGAATT
TACAATGAAAATGCAAACTTTGAGGGTGATGACTGTAGTGATTTATCCACTTTTGCACTT
CAATTTCGATTGCTAAGGCAACACGGTTACAACATCTCTCCCGGTAAGTCCATTATGGAG
TATGCGTTTGATGTTGTTTATAATCGTTGTATGTTTGAAAGAAGCCTAATCGCGTGTGTT
CTTCCTTTGAAAAAAACAGAATTTTTCAGCAAATTTCAAGATGGGAATGGAAATTTCAAG
GTGTCGCGTTCTAGTGATGATGATGTGTTAGGATTTTTGAGTTTATACGAAGCTTCACAT
GTAAGGACTCATGGTGAAGACATTTTAGAAAATGCACTCAATTTCTCCACTACTCATCTT
GAGTCTGCGGCTCCACATTTGAACTCTCCTCTTAAAGAGCAAGTGACACATGCCCTTGAG
CAATCTTTGCACAAGGGAATTCCTCGAGTAGAGACACGATTCTTCATATCCTCAATCTAC
GAGAAGGATGAATTAAAGAACGATGCGTTACTTAGATTTGCCAAATTGGATTTCAACTTG
CTCCAAATGCTTCACAAACAAGAACTTGCTGAAGTATCAAGGTGGTGGAAGGAATTGGAT
TTTGTGACAACGCTTCCATATGCTAGAGACAGAGTAGTTGAATGTTATTTTTGGACATTA
GGAGTGTATTTTGAGCCTCAATATTCTCAAGCTCGCGTCATGCTTGCTAAGACCATATCC
ATCATTTCTATTGTTGACGATACCTTTGATTCTTATGGTTTAGTTAAAGAACTTAACACA
TACACAGACGCCATACAAAGATGGGATATAAGTGAAATTGATCGTCTTCCTGATTACATG
AAGATCAGTTATAAAGCTGTTCTTGATCTTTACAAAGATTATGAAAATGAATTGTCTAAC
GATGGAAGATCTCATGTTGTCTATCATGCAAAAGAAAGAATGAAAGAAATAGTGAGGAAC
TATAACGTCGAGGCTAAATGGTTTATTGAAGGATATATGCCTCCTGTTTCTGAGTATCTA
AGCAATGCTTTAGTAACTAGTACTTCTTACTTGCTCACAACAACATCATATTTGGGCATG
AAATCTGCTACTGAGCATGATTTCGAATGGTTGTCAAGGAACCCTCAAATTCTTAAAGCT
AATGCAACATTATGTCGCGTTATTGATGACATAGCCACATACGAGATGACGAGGACTAGA
GCGACTGTTACTGGTGGTAGAGGGGAGGCACTTCCCGAGGCTGTTGTTGAGGCCCTAGCT
AGGGGTAGGGGTAGAGCCCGAGCTAGAGGTCGTGCTCGTGGAACGACACTAGCCAGAGGT
CGTGGCCGTGGAGCAGCACCAGTGAGAGGTCGTACTAGAGAGGCCTCTCCTGAGCCTCAG
ATTGATGACAGAGAGGACCAGGTTCCTCCAGAGCCTGCAGTCACACCTTTGCTTTAG
