Microarray Probes on PGSC0003DMT400079770
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40896_PI426222305 |
JHI_St_60k_v1 |
CTGGGGTTGGAAAAAGTAGTCTTCTTCTCACTTTTATTTCACATCATCTTTTTCAAGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079770
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079770 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G03530.1 |
+3 |
5e-102 |
304 |
147/204 (72%) |
RAB GTPase homolog C2A | chr5:885741-887061 REVERSE LENGTH=210 |
Transcript Sequence (1153 bp)
>PGSC0003DMT400079770 1153 pgsc_dm_v3.4
GTTTTTTCTTTCTTGTTTTCACCGAACTTTGACTGTGAGATTTTTAGAAAAAAAAGAGAT
TTTTTTTATCAAGTGTTCAAGTATGTATACTTAAAAATTAGTGTTTTTTTAAGGTTTTCT
TGATGATGGGTACAAGGAAGAATCACAACGTTGGATTTAGTAGTAGCTATGATTATTCAT
TCAAGATTCTGCTTGTTGGAGATTCTGGGGTTGGAAAAAGTAGTCTTCTTCTCACTTTTA
TTTCACATCATCTTTTTCAAGATCTTTCTCCAACTGTTGGTGTGGACTTCAAAATCAGGA
TGTTAACTGTTGGCGGCAAGAGGTTGAAATTAACAATTTGGGATACAGCTGGACAAGAGA
GGTTTGGAGCATTAACAAGCTCATATTATCGAGGGGCTCACGGAATAATTCTAGTGTATG
ATGTAACAAGGCGAGAGACCTTTACAAACTTATCAGAAACTTGGGCGAAGGATATAAAGT
CTTACTCCACGAATCCCGAGTGTATCAAGATGCTAGTTGGGAACAAAGTTGATAGGGATA
GTGAAAGAGCTGTAACTAGAGAAGAAGGCCTGGCATTTGCGAAGGAGCACAATTGTTTAT
TTCTCGAATGTAGCGCTAGGACAAGAGAAAACGTGCAGCTATGTTTTAAAGATCTCACAC
TTAAGATACTAGATGTACCAAGTCTAGTGGAGAAAGGTTCTGCAGTAGTGAAAAAACCAA
TCTTGAAACAGAAAGAAGTGCACAAGTCTCAACGTAGCGGAAACTGTTGCTCCTAGTTGA
TATACTTGTGCTAAACTATACTGCAGTTCAGAGGAAAACTCTTGAACGGAGCGTGATGCT
CGTTACAAGGATGTGCAGTCAGACGACAAGCTCATCGATCAATCTAGTGAAGGTACTGTT
CTTTTTTTCGCTTGCCGTAGCTAGATTACGTTCGTGTACTTAGATGTAAAGATTTTTTTT
TTTCATTTGTTAAAATCTTTTACAAGAATGGTGCCATAAAGCCTCTTTTATCTCATGGGG
AGATGTAACAGGACTTGTACCAAATGAATTTTGTGGCTTAAAGAAAGTCGTTCAATATAA
ACATGTACAATATATATATATATCATCATCTTGTGGAGAGATGTACAAGTTTTGTATCAA
AACAATTTTTTTT
