Microarray Probes on PGSC0003DMT400079560
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47048_PI426222305 |
JHI_St_60k_v1 |
GTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTTTGCACTCTTTGTAAGAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079560
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079560 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G70370.1 |
+2 |
0.0 |
696 |
339/599 (57%) |
polygalacturonase 2 | chr1:26513003-26514998 REVERSE LENGTH=626 |
Transcript Sequence (2267 bp)
>PGSC0003DMT400079560 2267 pgsc_dm_v3.4
TCACACTCTCTCTTTTCACACTAAAGCAATGCATACCAAAACTTTTCTTTCTTCATGCAT
CCTACTTGTTCTTTTGTTCTCACTTTCATCTTTCAATGTAAGTAACTCTTATGTTCCTCT
CTGTTTCTGTTTCTTGAAGTAATCTTCATTTGGTTTGGTACAAAATTTGATTTGGATTTG
GTTTTGACCAAAATCATAATAGAAAAAATCGAACCCAAACTAATTAGGCATAACTATTGT
AACATTATGTACTCATGGTACGGTGCCAATGCAGGTTGTTGTGGCTAGAAATGGAGACAA
ATCCGGGAACCCATTTACGCCAAAAGGTTATCTGATTAGATACTGGAGTAAACATGTGTC
AAATGACTTACCAAAGCCATGGTTCCTTCTCAACAAGGCATCTCCATTGAGTGCTGCTCA
ATATGCAACTTACTCAAAACTTGTTACTGATCAAAATGCACTGACCACACAACTTCAATC
CTTTTGCTCTTCAGCAAATCTCATGTGCGCACCAGATTTGTCACCAAGTCTCGAAAAACA
CACAGGAGATATCCACTTTGCCTCTTACGGTGACAAGAACTTTACCAATTACGGCACCAA
AGAATCTGGTGTCGGATTCAACTCCTTCAAGAACTATTCTGATGAAGGAAATTTCCCTGT
GAATTCTTTCAGGCGCTACAGTAGAGATTCTCCCCATGATAATCAATTTGACAACTATGC
CCCTGATGGCAATGTACCTGACCAAAGTTTCAACAGCTATAGCAAAAATACTCCAGGGGG
CTCTGGCCAATTCAATAATTACGACCCAAATAGCAATGTTGCCAATATGGGGTTCAATTC
CTATGCTGACAATGGAGCTGGTTCGGTCCAAAAATTCACAAATTACGCCCCAAGTGGGTC
TAATATCCCTAATATGCACTTCACTTCTTATTCCGACCACGGAACGGGAGGGGAAGAAGA
ATTCAAATCCTACTCAGACGATGCAAATGGTGGAGTCCAATCTTTCAAAAACTATGGCAA
AGATGGGAATGGTCCTAATGGTAAATTCATCGAGTATGGAAACAAAGCCAATGATCCTCA
AAACAATTTCAACAACTATGGCGTTGAAGGTAATGGTATATCTGAGACTTTTACTAACTA
CAGAGATCAATCAACTCTTGGCGATGACAAGTTCACCGTCTATGTTAAGGACGCAAATGG
TGGTGAAGCAAATTTCACCAACTATGGTCAATCTACCGATGAATTTGATAACGGTACTGA
TGAATTCACTACCTATGGCGAAGGGGGTAATGACCCACATATTAATTTCAAAACTTACGG
AGTTAACAACAACTTCAAAGGTTATGTCAAAGACACTGCCACATTTTCCAATTACCGAAA
GAAAACTCCCCAAGTTTCGGCTTCATTGACCGGTGGCAAAAAGGTGAATAACCGGTGGGT
TGAGCCCGGAAAGTTTTTCCGGGAGAAGATGTTGAAGAGTGGTACAATCATGCCTATGCC
AGATATTAAGGATAAGATGCCTAAAAGGTCATTTTTGCCCCGGGTGATTGCTGCGAAATT
ACCCTTTTCTACCTCAAAGATTGATGAGCTGAAGAAAATCTTCCATGCCGCCAATGATTC
TCAGGTGGCAAAGATTATCGGCGATGCTCTCAGTGAATGTGAAAGAGCACCGAGCGCCGG
CGAGACGAAACGGTGTGCTAAGTCAGCTGAAGATATGATTGATTTCGCAACATCAGTATT
GGGTCGAAATGTGGTGGTTCGAACGACTGAGAATACAAAAGGATCAAATGGGAATATCAT
GATAGGAGCAGTCAAAGGAATCAACGGTGGAAAAGTTACAAAATCAGTATCATGTCACCA
GACCTTGTTCCCTTACTTACTGTATTACTGTCATTCGGTTCCTAAAGTCCGGGTCTATGA
AGCGGATATTTTGGACCCGAATTCAAAGGCTAATATCAATCACGGTGTTGCCATTTGCCA
CGTGGATACTTCTTTATGGGGACCCAAGCACGGAGCCTTCATTGCACTCGGGTCGGGACC
CGGGAAAATAGAGGTTTGTCACTGGATCTTTGAGAATGACATGACTTGGGCAACTGCAGA
TTGAGCCAAGGAGTAAAACTTGGTTTTAATAAATATTCAAAGTTTCTATTGTTCTCTCTA
TATTTGGGCAAAGTAATGTAGCCCCTATGTTCACTTTTATTCATCCACAAAGGATTTTGC
ACTCTTTGTAAGAAATAAATAAAATAAATAAGATGCATATTTTAATT
