Microarray Probes on PGSC0003DMT400079427
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35353_PI426222305 |
JHI_St_60k_v1 |
GGCCTACAACTTATGCAAATTGGGCTTCAGGACGTACCTTCAGAGTTGGTGATACTTTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079427
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079427 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20230.1 |
+1 |
1e-33 |
122 |
57/119 (48%) |
blue-copper-binding protein | chr5:6826626-6827408 FORWARD LENGTH=196 |
Transcript Sequence (714 bp)
>PGSC0003DMT400079427 714 pgsc_dm_v3.4
ATGGTTACAAAGATGAAAATTGCACTAGTCTTGATGACTATTTTGGCGGTGTTGCCGGGG
AATATAGTAGCGGTTGATCATATAGTTGGTGATACTATGGGATGGACAATTCCCTCAGGG
CCTACAACTTATGCAAATTGGGCTTCAGGACGTACCTTCAGAGTTGGTGATACTTTAGTG
TTCAACTTTGCAACTGGAGCACATGATGTAGCCAAAGTAACAAAGAGTGCATATGATTCT
TGTAGCTCCTCAAGTCCTATTACTCTTATTACTGTTGGACCAGCCAATATTACTCTAAAT
TCCACAGGTAGTGAGTATTTTATTTGTACTTTTGGCCAACATTGTAATGCTGGCCAAAAA
CTAGCTATCAATGTTACAACATCTTCCACTACTACTCCTAGCCCTGCCCCATCCCCTGCT
ACCTCCCCTGCCCCATCACCCGTCCCGAACCCTACCCGTGCACCAACGCCAACGCCAAGT
CCATCACCATCAGCCGGTCCATTTGGACCGTCTCCTAGTCCAAGTGGTGGTGCAGGAGCT
TCACCATCGTCTGCACCACCACCTGGACCAGTCACACCGGAGCCTACTACTCCTTCACCT
ACGACACCAAGCGATGGTCTAGTTCCTCCACCGGCTCCAAGCTCTGCCTCGCGAAGCGTT
TTTGCACCTGCCTTGATCATGTTCATGTCCATTGCTATTAGTATCATGTGGTAG
