Microarray Probes on PGSC0003DMT400079358
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35432_PI426222305 |
JHI_St_60k_v1 |
CCCTAGTTTTCGTTCTTATGGCTCAGAGATTGAACAATTTGACAGTAAAAGTTTATGCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400079358
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400079358 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20250.4 |
+1 |
3e-72 |
246 |
123/234 (53%) |
Raffinose synthase family protein | chr5:6833730-6836635 FORWARD LENGTH=844 |
Transcript Sequence (1392 bp)
>PGSC0003DMT400079358 1392 pgsc_dm_v3.4
GGGAAGTGAACTGTTTTGGTAATATGATTACAAATAGTGAGAGTTGTGTCTAACGAACAT
AATGATGTTTTCAGCCTTTTGAAGATATGGAACATGAACAAATACAATGGTGTTCTTGGA
ATATACAACTGCCAAGGTGCAGCGTGGAGCACGGCTGAGAGGAAGACCACGTTCCACAAA
ACCAACTCAGAGGCGATAACAGGCTATATAAGGGGCCGTGATGTCCATTTCATATCTGAA
GCTGCCTTGGACCCCAACTGGAGTGGAGACACAGTTCTTTACTCTCATCGAAGTGCTGAG
CTTGTTGTTCTCCCGTATAATGCAGCAATGCCTGTTTCTTTTAAGATCCTTGAGCACGAG
ACATACACTGTCACGCCTATTAAGGTCTTGGCACCTGGCTTCAGCTTTGCACCTTTGGGG
CTCATTGACATGTACAATGCTGGTGGGGCAATTGAAGGGCTAAAATATGAGGTGAAGGCA
GGCGCAGAATTGTCTGAACTCGAGGCTGGATATCAAGGTGAAGGAAATCTTGTGGCTGAA
GATAAAATTGAGAACTTGAGCACAGAAGCAGTTGCAGTAGTGTCGATGGAAGTAAGGGGA
TGTGGCCGATTTGGTATTTACTCGTCTGTCAAGCCGAGGAAGTGCAGTGTGGGTGGAGAT
ATGGTTGATTTTGCCTATAACTCAGAATCTGGTTTGTTAACTTTGAATCTTGATGCTATG
CCTCCAGCAGATCAGAAAGTGCATATCATTGAAGTTGAAGTATAGATATTAGGAAGGAAG
ACATTATTTGGCTTAGATTATTAAGAAGGGGATTTTTTGGGGACTCAAAAGGTGGGATTG
GGACTTAGATTTATGGTATAACTTCTCCGGTCCTGCTAACACGAGATGCTTTGTGCCTTG
CTAGATTATGATCCATAGTATGTGTCTCCACTTATTTGTATCACCATTGAATAGTTAAGC
TCCATTTGCTTTTCATGGAAAGAATGGCATGGTAGAAGGTGATGATCTAAGAGAAGGAAT
TTAATGTGGTCCATTAATAATGGAATATGTGATTATGATTGTGTTTGACAATGCTGTTTT
CATTCTCTTGTTATGTTTGGGCCAACTTGCGCAAACATTGATTATTTGTAGAGATTATGA
TATTTTTTGGTCCCGTTTGGATTGCTTTTCTTGTGGCTATTACGGTGGAAGAATTGTAAA
TTTGATTTTCCAGTACCTTCTCCCCCTTTGCAGCTTTGGTTCCTACTACCTCCAAACCCC
AGAGCTTTCAGTCCTCCAACGCTCCTACCCCTAGTTTTCGTTCTTATGGCTCAGAGATTG
AACAATTTGACAGTAAAAGTTTATGCTTTGTTATGTATCGTTGCTATTGTATATTGTATT
GTGTTGTCTTGA
