Microarray Probes on PGSC0003DMT400078987
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37514_PI426222305 |
JHI_St_60k_v1 |
TCACAAAATAAGAGGAGTGCCAAGGGATTCAAAAGTCTAGGGCAATTGAGGGGCCTGATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078987
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078987 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G15580.1 |
+3 |
6e-11 |
60 |
45/110 (41%) |
RING/U-box superfamily protein | chr2:6797687-6798815 FORWARD LENGTH=196 |
Transcript Sequence (823 bp)
>PGSC0003DMT400078987 823 pgsc_dm_v3.4
AATAAATATATAGTACTATAGAAGAAGAAGTTAAGCCTATTAATTTCTTTGAATTTTTTT
CGAAATATTGGATATTTTGATATCAAAAGAGTTCCTTCATCTTGAAATCTGAGTAATATT
CATTTTCTTGTATCATATTACTAGTAAAAATGGCAGGTATGCTTGCTGGTGTTGAATGCG
CTAGAAGAAGAAAATTTCATAAAAATAGTGGCTTGTTAGATTCATCATATAATACATCTT
CATCCACAAGAAGATCTTTTCTTTGTCTATACACAAGTAGCCATGAACATAATCTTACCT
CAAGATTTTCCAAGGAAAGAAATGCAACAAGCCAAGAATATGAAGATGAGAAATTAGGTG
AAGTTGCAAGAGAAGCCAAGCAAAGACTGGATGAGAGGCTCAGTTCCCAATGGAAATCAC
AAAATAAGAGGAGTGCCAAGGGATTCAAAAGTCTAGGGCAATTGAGGGGCCTGATTTGCT
GACAAATGGTTTGACCAATATTGAAGTTGTAGTTGAGAAAGAAAAAGACTATTTTTAATA
CTTCAATTAGCATCTACGATCCTAAATCAATAGAATACATGACATGTATCTTTCATACAC
ATATTTATAGTTAAATGATATGTGTTCTTTGTTTCTCACTTGAGACGATGTGAGATACAT
GTGATAACTTGAGGAATAAGGATAATTTTGATTGCTAGAGCGAGTTTTGCTGAATTGATA
TTTGATTGAACATCAAGTGTAAATAGTATTTTTGCCTTTTACGAGTGCTCTTTTGTGGAC
TTGCAAATAGTGTGTAAGATTTCTTGTAATGAAGCTAATTGAC
