Microarray Probes on PGSC0003DMT400078930
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37524_PI426222305 |
JHI_St_60k_v1 |
GGTGCATTTTCCTTGGAGTTTAGTGTGGAAATAGAGTAGTATGATTATGTTTTTTGACTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078930
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078930 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20410.1 |
+2 |
0.0 |
699 |
334/417 (80%) |
monogalactosyldiacylglycerol synthase 2 | chr5:6896765-6898581 FORWARD LENGTH=468 |
Transcript Sequence (3231 bp)
>PGSC0003DMT400078930 3231 pgsc_dm_v3.4
CAGAATGAATCCGACGGCTATAAATCCATGAAAAACTCCGCCATTATTGTGTTTTCCCTG
TAAAGCATCATTCTTTTTTATTTTGAACTGAAAAAAGGCATCATTCCAGTATCTTAAACA
GCACCTTCCCTTCTCCTCTTATTATAATTGTACTGAAAAAACCCACCCCATTTCCTCCAT
AATTGTACCGTCTTAGCTCCATTTTCTGAAGAAGAAGAAAAAGGGTCTTTAATGGTGTTC
AAATCTTGAATTATTATGTTAAGTTCCGTTTTCTGAAAAAGGGTGTCCAAATCTTGAAAT
TTTCTTTGAATTTGTTGAACTAGTACCCTTTTTTCATCCTTGTACTGTCTAGGTCCATTT
TCTTAAGAAGAAGAAAAAGGGCCTTAAAATGGTGTCCAAAATTTGATCTTTCTTCCATAC
TTGTGTTGTCTAGCTCTGTAATCTCCATTTTTCTGAAAAGGGTGTCCAAAATTTGATCTT
TCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAGAAAG
GGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTA
ATCTCCATTTTCTGAGAAAGGGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATAC
TTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAGAAAGGGTGTCCAAAATTTGATCTT
TCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAGAAAG
GGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTA
ATCTCCATTTTCTGAGAAAGGGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATAC
TTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAGAAAGGGTGTCCAAAATTTGATCTT
TCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAGAAAG
GGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTA
ATCTCCATTTTCTGAGAAAGGGTGTCCAAAATTTGATCTTTCTCCTCATTTCCTTCATAC
TTGTGTTGTCTAGCTCTGTAATCTCCATTTTCTGAAAAAGGGTGTCCAAAATTTGATCTT
TCTCTTCATTTCCTTCATACTTGTGTTGTCTAGCTCTGTAATCTCCATTTTTCTGAAAAA
GGGTGTTCAAATCTTGAATTTTTCTTAAAATTTGTTGAACCAGTACCCTATTTTCTTCTT
ACTTGTGTTGTCTAGCTCTGTAAGTCCAAAGTTTGATTTTTCTTAAAATTTGTTACTAAA
ACTTGTTATTGTTTTAACTTTACTCAACTTCTTTTGATGTTTTACCGGATATAGAAAGTT
AACAACCCCATTTATTCTCTAGATATCTACCATTCATCTTCTTGAAAAAGGGTGTCCAAA
TCTTGGATTTTCTTAAGCCTTTTTTGTGTTCTTGTGATCTTTGCCAGAAAACCCAATTTC
AGGTAACTTATTGTTAGGATTGGTGAAAAAAAGAGGTTAGAATATGGTGAGTAATGTGAC
TACCCCTAGGAAATCTATACACAGAGTGTTGGAGAGAGTTGGGGTTTATGGGTTTGTTGG
TGGTAGCAGCCAGAAGAGATTAAAGTGTGATTTTCAAGATGAAGAATATGACACCATGGA
AATGGTGCAGATTGGTGCTGAAAGGACTAAAAATGTGCTTATTTTGATGAGTGATACTGG
TGGTGGACATAGGGCTTCAGCTGAGGCAATTCGAGATGCTTTCAAGTTAGAATTTGGGGA
TGAATATAGAATTTTTGTGAAGGATGTCTGGAAGGAATACACTGGCTGGCCATTGAACAA
CATGGAGCAACAATACAAGTTCATGGTTAAACATGTTGGCCTTTGGAGTGTTGCATTTCA
TGGCACGTCACCTCGTTGGATACACTCTGTCTATCTTGCTGCTATTGCCGCCTTCTATGC
TAAAGAGGTAGAAGCTGGCCTGATGGAGTACAAGCCAGACATAATCATTAGTGTTCATCC
TCTCATGCAACACATTCCTCTATGGGTTCTTAAATGGCAAGGCCTACAGAAAAAAGTTAT
TTTCGTAACCGTCATTACGGATCTCAACACTTGCCACCGGACATGGTTTCATCCAGGAGT
CAATCGTTTGTACTGCCCCTCTGAGGAGGTAGCAAAGAGGGCATCACTAGATCGCTTGGA
AGGATCTCAAATACGTGTTTTTGGGTTGCCCATCCGGCCTTCTTTTTGCCGGGCAGTTCT
TTCCAAGGATGACCTTAGAGTAGAACTTGAGATGGATCCCACATTGCCAGCGGTTTTGCT
GATGGGTGGCGGTGAAGGGATGGGTCCTGTGAAGAAAACTGCAAAGGCTCTTGGAGAAGC
ACTCTTCGATAAGGAACTTGGCAAACCTATCGGTCAAATGATTGTCATATGTGGACGCAA
TGAAGCCTTAGCATCCACATTACGATCACTCGAATGGAGCATCCCCGTTCAGATCAAGGG
ATTTCAGAAACAGATGGAAAAGTGGATGGGCGCTTGTGATTGTATTATCACAAAGGCTGG
ACCTGGTACAATTGCAGAAGCATTAATCAGAGGGCTTCCCATTATTCTGAACGACTACAT
CCCCGGACAAGAGAAGGGAAATGTTCCGTTCGTAGTCGACAATGGAGCTGGTGTTTTCAC
ACGACGCCCCAAGGAAACAGCTCGGATCGTTGCAGAATGGTTTACCACCAAAAGCGATGA
GCTTAAAAGGAAGTCAGAGAACGCGCTGAAACTTGCACAACCTAATGCTGTCTTTGATAT
TGTGAAGGACATACATGAACTTGCATGCCAGAGAGGTCCTCTTGCCAACATTCCTTACAT
ATTGACATCTTCATTTTCAAGCCTAATTTAGCATAATAGATTGAAGTTGGTTTGTTGCTA
GTTGCATATTATGTAGACAAGAATAGGTTCAATTGATCAGTCTCATTCTTTGGCCACAAA
GGCTTTGGTGCTATTCTTTTAGCTTAGTCAAGTTGTGATCCTTTGTTAAAAATATAAGAA
AAAGTGAAGGTGCATTTTCCTTGGAGTTTAGTGTGGAAATAGAGTAGTATGATTATGTTT
TTTGACTCTATTCTCATGTTAATTTTTTTGTATATATTCTTTTAATATGAC
