Microarray Probes on PGSC0003DMT400078426
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11007_PI426222305 |
JHI_St_60k_v1 |
ATTATCAATTCAAATGTTTCTGCACTGACAGGCCTCATGCATTGAGTTGCAAACCTTCCA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400078426
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400078426 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18390.2 |
+3 |
9e-176 |
525 |
301/638 (47%) |
Protein kinase superfamily protein | chr1:6327463-6329935 FORWARD LENGTH=654 |
Transcript Sequence (2442 bp)
>PGSC0003DMT400078426 2442 pgsc_dm_v3.4
GTCAGAGCCAGTTGCAGAGAGCAAAAAAATCCATCTTTTTGCTTAAAAAATCAATCTTTC
TTCTATAGGAAAAAACCCAAGAAACCCCTTTTCTCTTTTTAGTATAATTTTCATTATCTA
CTTGTTTAGTTTGTATATTTTCAGCTGTTTCAAGATTACAAATGAAACAAGAAAAAAGGT
ATTTCTTGATAGTATCATTAAACCTTTGTGTTTTATGCTTCATTTTGCAAATAGATAAGT
GTTCTGCTGTTGATCCACAGTTTGTAGTATGTAATAAATCAGTAAATTGTAAATATGGTC
CAAGAATAAGCTTTCCATTTTATATTGAAGATGTTCAAGAATCTTATTGTGGGTACCCTG
GATTTGGGCTAAATTGTAGTGAACAAGGGTTTCCTGTTGTACATATAGCTGGAAATGAGT
ATGTAGTTGAAGATATTAGATATCAAGATCATACTTTTCAGCTTAAAAATTCAATCTTTA
ACAGTAGTGTAAGGAATGGATGTGTTTCTGATATCAAGAATATTTCACTCGATAATCGCC
CTTTTCAGTTTGTTAAGAAATCGAAAATTTACTTCTTGTCGAAGTGTAATGGTTCGATAT
CTGGGAATCTTTCGAAGCACATGATTGTTTTTGGTTGTGGTGGGGAAAATGGGAATGATT
GGGGTTATGCAATGTTTGCTGAGGATGAGAGCTTTGAGTCTGCATTACAAGTGTGTGAAA
AACATGTGATGGCACCTGTAGAAATGCTTGGGGATGAGGGAAGTAATCGAGATGTTGACT
ATCTGGTGCTTTTGAGAAGGGGGTTTAGATTGAAATGGACTGCTAGTAATTGCAGTGAAT
GTGCAGCAAGTAGAGGACATTGCGGATTTGATGCTATCAATTATCAATTCAAATGTTTCT
GCACTGACAGGCCTCATGCATTGAGTTGCAAACCTTCCAGGAATTATAATTTGGGGTTGA
TTCTTGGCTCAGTTTTAGGTGGAGCTGTGTTTATAATCCTCGTGGTCACTTTCATTGTTT
GTTGTTACAAGAAAGAACACAAAAGTTGTTTGTACTTCACCTCGCGAAAAAAATCTTGTG
ATCGTTCCTTAACACATGATTTTGATGGAAGTAGTAATTACCATGGAGTCTCGGTCTTCT
CCTATGTTGAACTTGAAGAAGCTACAAGTAACTTCGATTCCTCCAATGAACTAGGAGATG
GAGGTTTTGGTGCTGTTTACTATGGTAAACTTAAGGATGGGAGAGAAGTTGCAGTGAAGC
GACTTTACGAGCACAATTGCAAGAGAATGGAACAGTTTAAAAATGAAATTGACATTCTCT
CTCGCCTAAGGCATCGAAATCTTGTTACCCTTTATGGTTGCACATCAAAGCACAGCCGTG
AACTCCTCCTTGTTTATGAATACATTCCCAATGGAACAGTGGCAGATCACCTGAATGGGG
ATAGAGCAAAGGACGGATTCCTCCCATGGCCTATCCGCATGAATATTGCTGTAGAAACTG
CTTGTGCATTGGCTTACCTCCATGCTTCTGACATAATACATCGCGATGTGAAGACTAGCA
ACATACTCCTCGACAGCAATTGTTGTGTCAAAGTTGCAGATTTTGGGCTTTCGAGACTTT
TTCCGAATGATGCTACTCATGTCTCAACTGCTCCTCAAGGGACTGCTGGATATGTTGATC
CAGAGTATCATGAATGTTACCAGCTCACTGATAAAAGTGATGTTTATAGTTTTGGTGTTG
TCCTTGTTGAACTTATCTCATCAATGCCTGCTGTTGATATTACTAGGCGTCGACATGAGA
TCAATTTGGCCAACTTAGCGATAAACAGGATTCAGAGATGTGCATTTGATGAGCTGATTG
ATCCATCTCTGGGATTTAAATCAGATGCACAGGTTATGAGAATGACTACTTCAGTAGCAG
AGCTAGCATTTCAATGCTTGCAGCTTGAAACGGACTTGAGACCAAAAATGGATGAAGTAC
TAGAGACACTCAAACATATTCAAGGCACCTATACGGATCAAATCAAAGATGAGAAGACGA
ATGACTCAATTGTTGATAACACAGAATGTAGTGGTGAAAAAGTCCCTACTTCTCCTACAT
CAGATAAAATAGTTTTGTTAAAGAAAATGCATTTGCCACCTTCACCTATTTCTGTAACTG
AGAGCTGGGTTAGTAGCTGTGGCAGTAGTAATGTTAGCGGGTGAAATTCTTACACTCTTT
GCTTTCATTTCAACATAAATGTTACAAATATGTACTCATTGATAATCTGTAAAGGAATAA
GTTGCTGAGACGTTCTTTTTATCTTTATTAGTTTTTACTCTTGTTCTTTATTTGCCGTTT
TCTGAACACAGTGGAGTGTAACTATTGAATATGGGCATGCTTTCTGCACTAACGAGCATG
CATATTTTTTACTATCCTGGATTTGAGGTTACTTAAATGAAT
