Microarray Probes on PGSC0003DMT400077647
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23519_PI426222305 |
JHI_St_60k_v1 |
ATGTTGATTGTGTAACAGGTGGAGGTAAAAAGGTAACTCGAGTGGAAGTGACTTTGGATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077647
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077647 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G37130.1 |
+3 |
0.0 |
879 |
418/526 (79%) |
nitrate reductase 2 | chr1:14158617-14161652 FORWARD LENGTH=917 |
Transcript Sequence (1778 bp)
>PGSC0003DMT400077647 1778 pgsc_dm_v3.4
ATTGATGAGATGTTGATTGTGTAACAGGTGGAGGTAAAAAGGTAACTCGAGTGGAAGTGA
CTTTGGATGGAGGAGAGACATGGAGTGTGTGTACACTTGATCACCCAGAGAAGCCAACTA
AGTATGGCAAGTACTGGTGTTGGTGCTTTTGGTCACTCGAGGTTGAGGTGCTCGACTTGC
TTAGTGCTAAAGAAATTGCTGTACGAGCTATCGATGAGACCCACAATACTCAACCCGAGA
AGCTTATTTGGAACGTCATGGGAATGATGAACAATTGTTGGTTTCGAGTGAAGATGAATG
TGTGCAAGCCTCACAAGGGAGAGATTGGTATAGTGTTTGAGCACCCGACCCAACCTGGAA
ACCAATCAGGTGGATGGATGGCAAAGGAGAGACACTTGGAGATATCAGCAGTGGCTCCTC
CAACACTAAAGAAGAGTATTTCAACTCCTTTCATGAACACAGCTTCGAAGATGTATTCCA
TGTCTGAGGTGAGGAAGCACAACTCTTCAGACTCTGCTTGGATCATAGTCCATGGACATA
TCTACGATGCCTCACGTTTCTTGAAAGACCATCCTGGTGGTGTTGACAGCATTCTCATCA
ATGCTGGAACTGATTGTACTGAGGAATTTGATGCAATTCATTCTGATAAGGCTAAGAAAC
TATTGGAGGACTTTAGGATTGGTGAACTCATAACTACTGGTTACACGTCTGATTCGTCTC
CAAACACTTCTGTCCATGGATCCTCTTCCATTAGTAGCTTCTTAGCACCTATTAAGGAAC
TTGTTCAAACACCAACAAGGAGTGTAGCTCTCATCCCAAGGGAAAAAATCCCTTGCAAAC
TCGTCGACAAGCAATCCATCTCCCATGATGTTAGAAAATTCAAATTTGCATTACCCTCTG
AGGATCAAGTCTTAGGCTTACCTGTTGGCAAACACATTTTCCTCTGTGCCACAGTTGATG
ACAAACTCTGCATGCGTGCCTACACGCCTACTAGCACAGTCGATGAAGTAGGGTTCTTCG
AGTTGGTTGTCAAAATCTACTTCAAAGGTGTTCACCCTAAATTCCCTAATGGAGGTCAAA
TGTCACAACATCTTGATTCTCTCCCAATAGGTGCATTCCTCGACGTTAAAGGTCCATTAG
GTCACATTGAATATCAAGGCAAGGGTAATTTCTTAGTCCATGGTAAACAAAAGTTTGCCA
AGAAGTTAGCTATGATAGCTGGTGGAACAGGTATAACTCCTGTATATCAAGTAATGCAAT
CAATTTTGAAAGATCCAGAAGACGACACAGAAATGTATGTGGTGTATGCAAACAGAACAG
AGGACGATATTTTGCTCAAAGAGGAACTCGATGCATGGGCAGAGCAAATCCCAGATAGAG
TTAAAGTTTGGTATGTCGTTCAAGAATCAATTACAGAAGGATGGAAGTATAGTACAGGAT
TTGTTACAGAAGCAATTCTCAGAGAACATATACCTCAACCATCTCATACAACATTGGCAT
TAGCATGTGGACCACCTCCTATGATACAATTTGCTATTAATCCAAACTTGGAGAAAATGG
GATATGACATTAAGGAGGAATTATTGGTGTTCTAAATTGGATGATGATCATATATTTCTG
GTGGAATAAATTCCTTTTTGTTTTCATTTGTACATATTGTACTTCTTGTAGTTCTTACAT
TTTAATTTTCTACTCAACTTTAGGTATAAAATGTTGTACTCTCTACTAGTATGTGTATGT
CAAAATTAAGTTGTAATATTCATCATGGAATTATAGTA
