Microarray Probes on PGSC0003DMT400077589
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32546_PI426222305 |
JHI_St_60k_v1 |
GCCTCTATGTGTGTATATTGTATTGGTAAAATGAAACTCAAACCGTTCAATCGTTCAATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400077589
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400077589 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G25030.1 |
+2 |
1e-37 |
138 |
102/253 (40%) |
RING/U-box superfamily protein | chr3:9122650-9123402 FORWARD LENGTH=250 |
Transcript Sequence (1222 bp)
>PGSC0003DMT400077589 1222 pgsc_dm_v3.4
TTTTAACGTATTTCTTCTTTCTTCATTGATTGCTGACTTGTTAGGAATCCTATGCCTTAC
CCTCTACGCTTTCTTCTTTCTTATATATGTATTCAATAAAACTACAACAGATCTGAGATT
TTCGATCTCCGAGAAATTCTCCATTTCTATATTCATTTGAAGAATGGAAAGCAATACTAG
TCTAAGAACTTTGATGTTTAATGATAAAATTGATACTCCAAACCTTTCGGATTTTCTCAG
AGTCAAACAAGATCATAACAATAATCTTGCCGGCCTTACATTAGGCGCGGTGTTGAGCAA
CAAACGAGAATCTTCTTCTTCTTCTTCCCCTGTTCACCGCTCCAACAGAACTCTCTTCGA
TATCATTCGAGACGATCCCAGCAGCAACAGCAGAAAACCCAGGAAATGGAAATATTTCAG
AAACAAACTCCGTCTCAAACCTAACATTTCCATTCAACACCATAGCAATCCAATAACTCC
TGTTGAAAATTTTACATCTGCATCTGGGTCAACAAGTAGAATATTGGAAACTGCAGAGAG
TGATGGAGAAGAAATTGGAGTGGAATTGGAGGATCAACCGGCGCGAATGTCATTAATGGC
CTTGTTAACAGAGAACGATGGAGATGAATCAGCGTTTATGATTGAAGATGGAGATGGAGA
TGGAGATGAAGAAGAAGATGAATTGGATAATAATGATGATACTGGAGTTGCTGGCATCGA
GGCCGGCACCATTGCCGTTGCTGATGTTGTTGCCGTCAGCGCCGGCGGAGAATATAATAA
TTGTTGTGTGTGTATGGTGAGACATAAGGGCGCTGCGTTTATACCTTGTGGACATACATT
TTGCAGATTGTGTTCAAGGGAACTTTGGGTTCAAAGGGGCAATTGCCCCCTCTGCAACAA
TTTCATATTAGAAGTTCTCGATATTTTCTAATTAATGTTAGCCTTTTCTTCCTCAATTTT
TTACTTTTATTTTATCTTCTTCGATTGTTACTTCATTTCATCTATCTCTTGTTTATATAT
CTCAGTGTTAATTAACCAAATTAAGTAGAACTGTGAACTACTTAGTGACTAATTTAGTAA
TGGCATAATAGGGAGGCAAGGGTCCTTGGTGCCTCTATGTGTGTATATTGTATTGGTAAA
ATGAAACTCAAACCGTTCAATCGTTCAATCTATTTAAGTTTGGACGAGTTATTGACTTGT
TTATTCATTAGCTCAATTCAAT
