Microarray Probes on PGSC0003DMT400076978
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39935_PI426222305 |
JHI_St_60k_v1 |
TTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGCTTTCCGCGAAACCTTGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076978
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076978 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G26070.1 |
+1 |
4e-52 |
178 |
83/139 (60%) |
Protein of unknown function (DUF778) | chr2:11105741-11106607 REVERSE LENGTH=250 |
Transcript Sequence (1315 bp)
>PGSC0003DMT400076978 1315 pgsc_dm_v3.4
GAAAAAGTGAATATTTTTTATATGTATGTTCCACACTTTCCCATTGCTTTCTTCTGTGTT
TCATCAATCAAAGAAGAGGACTAAGCAAAAGTTGTTTTCATCACTTTGATCTCTTGCCTC
ATTTTGAAGAAACCTTTTTTCATGACTGCAAAATTGTATGTCGCCATATGCCATCAGGAA
GACTTTCTTTAATGGATTTGGAACCTGCCTACAAAATGGAGAGCATAAGAGCAGTCCAAG
ATATTCAGCATGAATTTTGGCCTCTTGATGAAATAAATCTAGAGAATGCTAAGTTCCCCT
GTTGTTTAGTTTGGACTCCTCTACCAGTAGTCTCATGGTTGGCACCTTTCATTGGACATG
TAGGAATATGCAGAGAGGATGGTTCTGCCGTGGCCTTTTCTGGTTCCAACTTTATTAATG
TTGATGATTTTGCATTAGGTTCTGTGGCCAAATACCTTCAACTAGACAGAAAACAGGTAC
AATTTACTGTGGCATGCTCTTAGCCTTTCAATTGTTTGTTGTAGCATTATGTCACTCACT
AACCTCTCCCCCCATCTTCCTTAACGCATCGCCCCTACTATTTGTATTCACATATAACTT
CCAACACTTCCACCTGAAACACTATGCTTTGTTACCCCACATAAAGAAATAGGCCAATTT
GATCTTACCAACAAAGTATTGACAAGAATTTCTGAATGCTGAATAATTGGACAGTGCTGC
TTTCCGCGAAACCTTGCTGCACACACATGTAAGCATGGCTATAAACACACAGAGTTTGGG
TCTGCAATTTCTTGGGATGACGCCATCCAATCAAGCGTTCGTCATTTTGAGCACAAATCG
TACAATTTATTCACTTGCAACAGCTATTCTTTTCTTGCTAATTGTTTGAACAAGCTCTGC
TATGGTGGATCAATGGATTGGAACATGATCAATGTTGGCGCTCTTTTATTGTTCAAAGGA
CATTGGGTTGACAACATGTCAATCTTGAGATCATTTTCACCTTTTATGCTAGTTGTATGC
TTTGGCATTTTCATGGTGGGATGGCCTTTTTTGGTAGCATTATTGGCTTTCTCACTTCTT
CTTTTAGCATGGTTTATTTTTGGCACTTACTGTCTCAAAAATATGTTGGATTCCTAGGTT
TCTTGTATCACACTGCTACAAGATTAAAATTTGTTAATCCTTAATATGTGAGGGACCCCA
TAGAGTTTAATAACTCTGCACTGTCAAGTGTAGAAGAATTTGTACAATATCAAGTTACCT
AAAAATATTCACTTTGATTCAATTTATATGACACACTTTCCTTTTTAATCCATCG
