Microarray Probes on PGSC0003DMT400076803
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29965_PI426222305 |
JHI_St_60k_v1 |
GAGTACCTTGTCATCTTAGCTCTTCTGTATATGCTAATCAAAGTTTACTGTGATAACTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076803
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076803 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46180.1 |
+1 |
3e-116 |
350 |
173/237 (73%) |
ornithine-delta-aminotransferase | chr5:18718766-18721271 REVERSE LENGTH=475 |
Transcript Sequence (1148 bp)
>PGSC0003DMT400076803 1148 pgsc_dm_v3.4
TTGTCACTGAGGTTATTGTCACTTGTCCGGATGGAAAAATTATCTGTGCTTATTATGTTA
CCACACAATATTTGCCTTACTCTGCAGGTTATAATTCCCCCGGAAGGTTACCTGAAGGCT
GTTAGAGATCTTTGCTCAAAGTACAATATTTTGATGATTGCTGATGAAATACAAAGTGGC
TTGGCACGCTCTGGTCGATTGCTGGCTTGTGATTGGGAAGAAGTTCGTCCAGATGTTGTT
ATATTGGGAAAAGCATTAGGTGGTGGAGTCTTGCCTGTGAGTGCTGTGCTTGCAGATAAA
GATGTTATGCTTTGCATTCAGGCTGGAGAGCATGGAAGCACTTTTGGGGGGAATCCATTG
GCCAGTGCAGTTGCAATTGCATCTTTAGATGTGATTAGAGATGAAGGACTTGCAGAGAGA
TCTGCTCAAATGGGAGAACAACTTAGACATCAGCTGATAAAGATTCAGCGGCAATTTCCT
CATTTCATAAAGGAAGTTCGAGGGAAAGGCCTATTCAATGCTGTGGAGCTTAATAGCAAA
TCCTTATTACCTGTGACAGCTTATGATATATGTATGAAACTGAAGGAGAGAGGCATTCTT
GCTAAGCCAACTCATGATTCTATAATACGCTTGACGCCCCCGCTGTCAATGAGTTTGGAG
GAGCTTCAGGAAGGCTCTAATGCCCTGCATGATGTTTTAGTACATGATCTACCAAAGATG
CAGAAAGAGAAGCCAGCAAGAGTCTCCCATGCTACCTCCAATGTATGTGACCGGTGTGGC
CGTGACTTATATGGCTCTTCATAGGATATTTAAACTAGAGGTAGCTTCCATAGATAGCAG
TACGCCCTGCCTTCTTTTTCCACACTATACGTTTCATATCAATCCATATACTCATCTTTA
CGACATCGTAGGAAGTGTCATTGCAATACTACAGATATCTGATTTATGATAGAAATCAGA
ACCGAACTAATATATGTGAGTTCTTGGATACCAAGAAATGCAAATAAAGTTGTCTCTTCT
TTGAGTACCTTGTCATCTTAGCTCTTCTGTATATGCTAATCAAAGTTTACTGTGATAACT
GTTATAGTATGAAGTTGTAAAACACATAAGTTGGTATTACCTTTTTTTACTCTCTCTCTC
TCTGTATA
