Microarray Probes on PGSC0003DMT400076708
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22874_PI426222305 |
JHI_St_60k_v1 |
TTGTTCCATATCACCCACCATTTCATTTGGGACCTGATGACGCTTCTGATGCATCTTCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076708
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076708 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G04040.1 |
+1 |
0.0 |
1128 |
612/860 (71%) |
Patatin-like phospholipase family protein | chr5:1090346-1093003 FORWARD LENGTH=825 |
Transcript Sequence (3302 bp)
>PGSC0003DMT400076708 3302 pgsc_dm_v3.4
AATTTATTATTTTTCACATTTTCTCTGTATTTTTTTAGAAAGAAGCATTAGCCTGTTCTT
GAGTTTTTTCCTTTTTCTGTTTTTTTTTTTGAGAAATTTTAGTTTTTTTTGTTGATTCCT
AGAACCCCTTTTGATTTTGGTTTGTGGGGTTGCATAAAAATTGAATCTTGATTTCTGGGT
GTGGTGGGTTTTGGCTCTTTTGTCAAGTTCTTGTTGGTGTTTGAGCTGAATTGACAAGAT
TTTGTACAGAGGGAAATGTTGAAACAGGAAAAGATTGGGAATTTATCTCTTTGACTTTCC
TAAATTTGAGGTATTTTCTTTGATCTAGTAGTTCTATTCTTGAACTTTAACTTAGATTTG
TTAATTTCTGGTTCAATCTGATTCCTTTGAATCTTGTGAATAACCTTTGTTGTGCTAATC
TTGTTCAATTGGTATAAGTTTAGAGCCTTTAGATTATTAGGTATTTGTGTATTGGTTGTC
TTAACATTTTGCTGAGCAACCTATAGGAACCAGTTCCTTTGTCCATTTGAGATGGATATA
AGTAATGAGGCTACTATTGACTTCTTTGCTATTGGACCTTCTACGATATTGGGTCGAACA
ATTGCCTTTAGAGTCTTGTTTTGCAAGTCGATTACGCAGTTGAGGCATCGTTTGTTTCAT
TTCTTGGTGTATTACTTGTACAAGTTTAAGAATGGATTTTCGTACTACGTGACACCTTTG
ATTTCGTGGTTGCACCCTCGAAATCCACAAGGGATATTGGCATTAGTAACGCTTCTCGCC
TTCTTGTTGAGGCGGTATACTAATGTAAAAGTTAAGGCTGAGATGGCTTATAGGAGGAAG
TTTTGGAGGAATATGATGAGATCTGCCTTGACTTATGAGGAGTGGGCTCATGCTGCTAAG
ATGTTGGATAAAGAGACACCTAAATTGAATGAGGCAGATCTTTATGATGAAGAATTAGTT
CGAAATAAACTTCAAGAGCTTCGACATCGTAGGCAAGAGGGTTCTCTAAGAGATATCATT
TTCTGTATGAGAGCTGACCTTGTAAGGAATCTTGGTAATATGTGCAATTCAGAACTTCAC
AAGGGAAGGCTTCATGTGCCTAAACTTATTAAGGAATATATTGATGAGGTTTCAACTCAG
TTGAAAATGGTATGCGACTCTGATTCAGAGGAGCTTCTGTTGGAAGAGAAGCTTGCTTTC
ATGCATGAAACAAGACATGCCTTTGGTAGGACGGCTTTGCTTTTAAGTGGAGGTGCCTCT
CTAGGAGCTTTCCATGTTGGTGTGGTGAAAACGCTTGTAGAACACAAGCTTCTGCCACGG
ATAATTGCTGGTTCAAGTGTCGGATCGATTATGTGCTCCATAGTTGCGACTCGATCTTGG
CCTGAGCTCCAGAGTTTTTTCGAAGACCCCTGGCACTCCTTGCAATTTTTCGATCAGTTG
GGTGGAATTTTTACTATTTTCAGGAGGGTCATGACCCAGGGTGCTGTACATGAGATCAGA
CAGCTGCAGGTGCTTTTACGCAATCTCACGAATAATCTTACTTTCCAAGAAGCCTATGAC
ATGACTGGTAGAGTTCTGGGGATTACCGTTTGCTCCCCCAGGAAACATGAACCTCCTAGA
TGCTTGAATTACTTGACTTCACCTCATATTGTTATATGGAGTGCTGTGACTGCTTCTTGT
GCCTTCCCTGGTCTCTTCGAAGCTCAAGAACTGATGGCAAAGGATAGAAGTGGAGATCTT
GTTCCATATCACCCACCATTTCATTTGGGACCTGATGACGCTTCTGATGCATCTTCTCGT
CGATGGAGGGATGGTAGCTTGGAGGTAGATTTGCCAATGATGCAGCTAAAGGAGCTCTTC
AATGTCAATCACTTCATTGTGAGCCAGGCGAATCCGCATATCGCTCCTTTACTGAGGATC
AAGGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTGCCAAGCTTGCCCAGCTTGCTGAA
ATGGAGGTGAAGCACAGATGCCATCAGGTGTTAGAACTTGGTTTTCCCTTGGGAGGAATA
GCAAAACTTTTTGCTCAAGATTGGGAGGGTGACGTAACTGTTGTGATGCCAGCCACTCTA
GCTCAGTACTCGAAAATCATACAGAACCCTTCTACTCTGGAGCTGCAAAAGGCAGCAAAT
CAAGGAAGAAGGTGCACTTGGGAAAAACTCTCGGCCATGAAAGCAAACTGTGGAATTGAG
CTTGCACTTGATGAGTGTGTTGCTATTCTGAATCACATGCGTAGACTGAAAAGGAGTGCC
GAGAGAGCAGCTGCTGCTTCTCACGGCTTGTCAAGCACTGTCAGATTTAATGCTTCCAGA
AGAATTCCTTCTTGGAACTGCATTGCACGAGAGAATTCAACAGGCTCCCTTGAAGACTTT
CTTGCGGATGTTGCTGCTTCACATCATCAAGGAGGCAGTGGTTCAGGGGCACATGCCACC
CGAAATTGGCGAACACATCGTAGCACGCATGATGGCAGTGACAGTGAGCCCGAAAATGTG
GACCTTAACTCTTGGACAAGATCTGGTGGTCCTCTGATGAGGACAACATCTGCTGATAAG
TTTATCGACTTTGTCCAGAACTTGGAACTTGGTTCACGATTGAACAAAGGATTGACTATT
GACCTCAACAATCTCGTTCCTCAGATGGCTGGTAGGGACCTGTTCTCCCCAAGCCCAAGG
GTAACAACACCAGATAGAACTTCAGACACCGAATTTGATCAAAGAGATTTCAGTATTAGA
GTCCCCGCGAGTAGTTCAAGCATTATGGTAGGTGAAGGTGACCTTCTACAGCCTGAAAGG
ACTAACAACGGTATTGTCTTCAACGTGGTAAGAAAAGGAGACTTAACCCCATCGAATAAA
AGCCTCGATTCAGAAAATAACAGTTCTGTGCAGGACACAGTTGCTGAGTGCATGCAACTT
GACAGTCCAGAAAAGGAGATGGATATTAGCTCAGTATCTGAGGATGGTGAGGACTACGTT
GAGCAAGAAAGTGGTAAGATAAATGAAGTTGATTCCGTTCACTCTAGTGAAAATCGTTCA
ACCATTGATGATGGTGAAGATAAACAAGTTATCGACAAGCAAGTTATCGATCATTGAGAA
AACGAGGTTCGTTTAGCTTTGATTATTCTTCACAGAACAGGACACTCAAATTCTTTTATA
TTACTCAATGGATTATATAGTCAGAGCTAACACACTCAGAATTGGTATTTGTAAATAGAA
GAGGTACTAATTTTATGTGTAATAATTGTTTAGTGTACTGATCATCACTCTTTTAATTTA
CT
