Microarray Probes on PGSC0003DMT400076601
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12002_PI426222305 |
JHI_St_60k_v1 |
GAGTCTCATCATCAATACTTTTTACAGTAACAAAGAGATCTTTCTCAGGGAACTCATTAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076601
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076601 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56010.1 |
+1 |
0.0 |
1087 |
649/700 (93%) |
heat shock protein 81-3 | chr5:22681410-22683911 FORWARD LENGTH=699 |
Transcript Sequence (2536 bp)
>PGSC0003DMT400076601 2536 pgsc_dm_v3.4
AAACTCGCTATACTCTCCCCTGTAACTTCCATCTCCATCTCCATCTCCTTCTCCTTCATC
TCACTCTACGAATCTCTCAACACCATTGTAGATCACACAAAAATGGCGGAGGCAGAGACG
TTTGCTTTCCAAGCTGAGATCAACCAGCTTTTGAGTCTCATCATCAATACTTTTTACAGT
AACAAAGAGATCTTTCTCAGGGAACTCATTAGTAACTCTTCTGATGCACTGGACAAGATC
CGTTTTCAGAGTTTGACTGACAAGAGCAAGCTAGATGCTCAACCTGAACTTTTCATTCAC
ATCATCCCCGATAAGACCAACAATACCCTCACAATCATTGACAGTGGTGTTGGTATGACA
AAGGCTGATCTTGTGAACAACCTTGGTACAATTGCTAGGTCTGGCACCAAGGAATTTATG
GAGGCCATTGCTGCTGGTGCTGATGTAAGCATGATTGGGCAATTTGGTGTTGGTTTCTAC
TCTGCTTACTTGGTCGCTGAAAGGGTTGTTGTGACGACAAAGCACAATGATGATGAACAA
TATGTTTGGGAATCTCAAGCTGGTGGTTCATTCACTGTTGCAAGAGATACATCTGGTGAG
GACCTTGGCAGAGGTACCAAAATTACCCTCTTCCTCAAGGAGGACCAACTTGAATACCTT
GAAGAGCGAAGGCTCAAGGACCTGATTAAGAAGCATTCTGAGTTCATCAGCTATCCAATC
TCTTTGTGGGTTGAGAAGACCATAGAAAAGGAAATCTCTGATGATGAGGACGAAGAGGAG
AAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAAGAAAAGGAGAAGGAAGAGAAG
AAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTGGTGAATAAGCAGAAGCCC
ATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTATGCTGCATTCTACAAGAGC
CTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTG
GAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTTGACCTCTTTGACACCAAG
AAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTCATCATGGATAACTGTGAG
GAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCCGAGGACCTTCCC
CTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTGAAGGTTATTCGCAAAAAC
TTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATCGCCGAAAACAAAGAAGACTATGAC
AAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATCCATGAGGATTCACAGAAC
AGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAAAGTGGTGATGAGATGACC
AGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAATGATATTTACTACATTACT
GGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAGAAGCTGAAGAAGAAGGGT
TATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCAATTGGTCAATTGAAGGAA
TTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTCAAGCTTGAGGAGACTGAA
GATGAGAAGAAAAAGCACGAAGAACTAAAGGAGAAGTTTGAGGGTCTGTGCAAGGTGATT
AAGGATGTTCTAGGTGACAAGGTTGAGAAAGTGGTGGTCTCTGACCGTGTTGTGGATTCT
CCTTGCTGCTTGGTTACTGGAGAATATGGTTGGACTGCCAACATGGAGAGAATTATGAAG
GCACAAGCTCTCAGGGACTCTAGCATGGCTGGATACATGTCTAGCAAGAAGACCATGGAG
ATAAACCCAGAGAATGCCATCATGGATGAGCTCAGGAAGAGAGCTGATGCTGACAAGAAT
GACAAGTCCGTCAAGGATTTGGTTCTATTGTTGTTTGAGACTGCTCTTCTTACCTCAGGT
TTCAGCCTTGATGAGCCAAACACATTTGGCAACAGAATTCACAGGATGTTGAAACTTGGT
CTGAGTATTGATGAGGATAGTGGAGATGCTGAAGCTGACATGCCAGCATTGGAGGATCCT
GAAGTTGATGCTGAGGGCAGCAAGATGGAGGAAGTTGACTAAATCTAGGACACCAGTGTT
TTGTTTTGATTATTATGAAAGCCCTTAACCCCAGTAGTTTTTTTTTTTTCACTCAGCTCC
ACCAGCTGGACATGATATGATTTAAGTTTTTATGTTTTGTTTTTATTGCATTGTAGGGTA
GTAATTCATTGGCTCATTTTGTTACAACGTTTTATGTGACTATAGATTCTGTACTTTGCA
TAATTGCTCTTTGCATTCTTCTATGGATGTCTGCCTTGTTAGCTTGCAATATGCTTTATA
GGATTGGTCGTGACAAAGTGGTCTGAAGATTGTTTTTGTTTTGTTCTCTTTGTCAATTAT
TGGATTTGATTGGAAA
