Microarray Probes on PGSC0003DMT400076420
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15794_PI426222305 |
JHI_St_60k_v1 |
GGATTCTCCATTTGAAGCTTGAAAGTCTGAAACTTTGATTGTTTTTTCAACCCTTTTGCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400076420
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400076420 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27470.1 |
+1 |
1e-45 |
161 |
89/222 (40%) |
RING membrane-anchor 3 | chr4:13735576-13736307 FORWARD LENGTH=243 |
Transcript Sequence (1399 bp)
>PGSC0003DMT400076420 1399 pgsc_dm_v3.4
CAGCTCAGCAAACTTCTTGTTTACCTCTTTAAAGAAACCTATTTTCTTCTCTTTTTCCTC
TGTTTAATCACATGGGATTCTCCATTTGAAGCTTGAAAGTCTGAAACTTTGATTGTTTTT
TCAACCCTTTTGCTTGATTGATTTGGAAAGACCCTTGGATTGAACAAGTGCTCAGAAACA
AATCTCATGGCCTTCGAGCAGTATTATTCAAACGAGTGGAAATCGATCCCTACTCCAGAA
TCATCAGACTCAGAGAAGACGTCTGCCTGCTTCGATTGCAACATCTGCTTGGACTTTGCC
CGTGATCCGGTTGTTACACTTTGTGGCCATCTCTATTGTTGGCCCTGCATTTACAAGTGG
TTTCACTTCCAGAGTGACTCTCTGTCTTCGGATGAACGCCCTCGGTGTCCAGTTTGCAAG
GCTGAAATCTCCCAAACAGATTTAGTCCCTCTTTACGGGCGTGGGGTAACACTGCCTGAA
TCTGAGCCTGAAAACAAGCTCACTCTAAAAGTGCCTCCCAGGCCATCTGCTTTCGGTCCA
TTATCCTTGTCAAATTCCTTTAATCCTTCTCAGCAACCACCACATCCTAATGCCTATGAT
CCCTATGCCAGTTACCTCAACAGTTCATCGCCGCCTTCATTCAATCATGGAAACAATACA
TCAGTGGGAGTCTTTCATCCAGTTGTTGGAATGTTAGGAGAGATGGTTTACGCTAGGGTA
TTCAGAAACTCAGAGAGTTTATACACATATCCTAACTCCTACCATCTAGTGGCAAATAGT
AGTCCAAGATTGAGAAGGAGGGAAATGCAGGCTGACAAGTCTCTAAACAGAATTTCCCTT
TTCCTCTTCTGCTGTTTTCTTCTTTGCCTATTGTTATTCTAGTTTCATTTGAGGCACTCT
TTTGTCCTCTTCCATTTCATCTTGTACACATTGTATAAAATTGATGTTTTGATGAGCATC
AAATCATTTAAAATCATATATGTGAGATGATAATAAGCAAGATTTTGGCTCAAGCATAAT
GAGTTCAAACTGACATTTTTGAGTTATTATTGTCTCTCTCTGGCCCCAACATATCTTGAA
GTTTATGGAAGAGCTAGCTAAGTTTATAGAGTTTTTCTACTGGCACCACCAGTGGATGAG
CTGGGGAACCTTATCCGGTGCAAATCCGAATTACTGAAAACCGGATGAAAATCAACTCAT
GGCAAACTTCTTAATGTTATTAATGTGGATAAGTTAAATCACTGTTTTATATGGCAGGCA
ATAGTGATTGTATGGTCCTCTGGCCCCAACATATCGTGGCTAAGTACTTATCATGTTGCT
TGTCCACATCTATTTTTTACATATATAAGTGACAATAACTATTAACCAGGCAGGTCATGG
TCGACATGCCTGCCCGGCA
