Microarray Probes on PGSC0003DMT400075700
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29468_PI426222305 |
JHI_St_60k_v1 |
CCATTCGTCTCAATTTGTATGATACCTTTTGTTTCAAAATGTTTGACAATATTGGGTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075700
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075700 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G11330.2 |
+1 |
0.0 |
417 |
225/534 (42%) |
S-locus lectin protein kinase family protein | chr1:3810372-3813416 FORWARD LENGTH=842 |
Transcript Sequence (2740 bp)
>PGSC0003DMT400075700 2740 pgsc_dm_v3.4
AAAAAGATGAGCAACAGCAGCAGCAGAAGAAGAAATTTGCAATATTTTGTTCATATAATT
CTTGTTATTCTTCGTTTTATCGATACAGGATTATGCAGTGAAGTGGATAACATTACCAGC
ATTCAATCTCTGAGAGATCCTGGAATTTTATCGTCTCCAGGAGGCGTATTCAAGTTAGGA
TTTTTCAGTCCTCAAAACAGTACTAATAGGTATGTTGGTATTTGGTACAATTTTTCTGTA
ACAACTGTCATTTGGGTGGCTAATAGGGACAAACCTTTAAGAGATTCTTCTGGTGTTGTA
AAGATATCTCGTGATGGAAATGTCGTTATAACGAATGGAGAGGAGGAGATTCTTTGGTCA
TCAAATGTTTCAACTTCTCAGGTAAACTCAATTGGCCTTCTCCAAGATTCTGGGAACTTT
GTTCTCGTTGATCATCGGGACAATATGAGCACTATATGGCAGAGTTTTGAACATCCTTCT
GATTCAACTATTCCTAGAATGAGAATAAGTGAAAATACAAGGACAGGGGAGATGGTAGAA
GCAAGATCTTGGAGAAGTCCTTCGGATCCTAATATCGGAGACTTTTCTTTAAGAATGAAC
TCTGGAGTCATTCCTCAAGTGTATATATGGAAAGGAAACCGTCCCTATTGGCGAACTGGT
CAATGGAATGGACAGATCTTTATAGGAGTGCAGAATATGTATGCTGTGGTATCTGATGGA
TTTAATGTAGTGAATGATCGCGAAGGTACTGTATATTTTACTGGACCTATTCGTGATAAT
TTTTTAAGGATATTAGTCTTGGATTGGAGAGGGAACTTGGTTCAATCATATTGGAATGTG
ACTGAGACAAACTGGAAGATAATATGGTCAGCTCCCAGTAACAATTGTGAAGTTTATGGA
ACGTGTGGTCCATTTGGGAGCTGCAATCATTTGGAGTCGCCGGTCTGTTCTTGTCTGAAA
GGTTTCGAGCCAAAGCATAGGGAAGAATGGGAAAAGGGGAATTGGACTAGTGGTTGTGTT
AGGAGGAGTGCTTTGCAATGTGAAGTTAAGAATAACACCGCGAATTCAAGTAAAGAAGAC
GGATTTCTAAAGATGGAGTTGATGAAATTGCCTGATTTTGCTGAAAGGTCATCTACTTCA
GAAGACTTATGTAGAAGCCAATGCTTGGGGAATTGTTCCTGCATAGGGTATGCATTTGAT
TCAGGTATCGGCTGTATGTCGTGGAGTGAAATGATTGACATTCAGCAGTTCCAAAGCTCG
GGGAAAGATCTCTATATTCACGTGGCAAATTCAGAGCTTGTGTTTTCTGCAGATCATGGT
AAAGACATAAAGAAAATCGTAATTCCAGTAATTGTTGGTTCTCTTACACTCTGTGTTTGT
CTGTTCCTTTGCTATACAATGGTGATCAGACGTAGAGGAGTGAAAAGAGAGGAGGTAGCT
TTACTTGGTAACAAAAGTCCAGTTAATATGGAAGAATTACCAGTCTTCAGCCTCGATACG
ATTGCAAATGCAACATCCCAATTCAATGAGGATAATAAGCTTGGTCAGGGCGGTTTTGGT
CCAGTTTACAAGGTACGAGTTTCATCTCTCTCGATCACTTCCCATAATTCAAGTTACTGA
TATTGGTGATTCCTTGTAGGGGAAATTGGAAGATGGGAAAGAAATAGCTGTCAAGAGGCT
CTCAAAAGCCTCGAAACAAGGGCTGGAGGAGTTCATGAATGAAGTGTTGGTGATCTCGAA
AGTCCAACATAGAAACCTTGTTAGACTCTGTGGATGCTGTGTCGATAAAGAGGAGAAGAT
GCTGATTTATGAATATATGCCAAAGAAAAGCTTAGATGTGTTTCTCTTTGATGAAGCACA
TCGAGACATTTTGGATTGGACAAAACGTTCCATTATAATCGAAGGAGTTGGTCGAGGACT
CCTTTATCTACACAGAGATTCAAGATTGAAGATAATTCATAGAGATCTAAAGCCAAGTAA
CATCTTGCTCGATAATAACTTCAATCCAAAGATTTCAGATTTTGGCATGGCTAGGATTTT
CGGATCTGATCAAGATCAAGCAGACACAATGAGAGTAGTTGGTACTTAGTAAGTGATCAT
TTATCTATATACAATACCATAACTTTGCATAATTTAACTACTCGAATCGTACTGACATAT
TTACAGTGGATACATGGCACCCGAATATGCAATGGAAGGAAGATTCTCAGAGAAATCCGA
TGTTTTCAGCTTTGGAGTTCTAGTCTTAGAGATCATAAGTGGTCGAAAAAGTACAAATTC
TTGGACTGAGACATCCTCTTTGAGCCTTTTGGGATATGCATGGAAGTTATGGAAAGAACA
AGATTTATCAACTTTTATCGATCCGTTTATATTGAATCCGAGCTCGGAAATAGAGATCAG
AAAATGCATACAGATTGGTTTACTATGTGTACAAGAATTTGCTGAAGACAGGCCAAGTAT
TTCATCTGTTCTTGTTATGCTTACTAGTGAAACAACAAGTCTTCCAGCACCATCACAACC
TGCTTTTACTGAAAGAAGACACTTCAGAATGTGCAATGAAAATAGAGAAACTAAGTTTAC
TTTGAACAAAATGAGTATCACAAACCTTACTGGTAGATAACATGAGCATATGAAATTACT
TTTTAAAGATTTGCACAATTGTTATAGTATGATCCATTCGTCTCAATTTGTATGATACCT
TTTGTTTCAAAATGTTTGACAATATTGGGTCCGTGTAAAG
