Microarray Probes on PGSC0003DMT400075596
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8204_PI426222305 |
JHI_St_60k_v1 |
ATTTTGCACTTCCACCAGCAATGAACATTGCAACCATAACACAGTTGTTTGGAGCTGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075596
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075596 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G20925.1 |
+2 |
1e-127 |
387 |
201/396 (51%) |
Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472 |
Transcript Sequence (1765 bp)
>PGSC0003DMT400075596 1765 pgsc_dm_v3.4
CGATAGTCCAATTGATATTTATATGGGTCGATGAGAGAAGAAAAATTATTATTCATTTCG
ATTAAGTTTCCTTCCTATTAATCTCGAAGTTCTTCTCAAAATACAGGGAAAAGATTCTAC
TTTAAAATTAAAGATCGTGGTTCTCGAACGAGCAATAGAACAGAAATTCAGGCGTAATAT
GCAAACACATACTCAAACTTGGTCTTAGCTGACAAGTAAGCATTCCAACTTTGAGAGTGC
ACGTCTAGACGACTCAACTTGATCCTCTGTTTCATCGTTCACACGAAAGGAACTCGATAT
GGGGCTTTTGGATCTCTTAGTTGCAGCATCAATGCCAGTTATTCAAATTCTTTTGATAAC
AGCACTTGGACTAGCTCTTGCATTAGATCGTTTCGCCATACTAGGAGAGGATGCAAGGAA
GCATTTGAATAATATTGTGTTTTACATATGCAATCCATCTCTGATTTCAAGCAACTTATC
CAAAACAATTACATACGAAAGCATGAAACGATTGTGGTTCATGCCTTTGAATATCTTCAT
CACTTTTATTGTTGGTTCGATTCTTGCTTGGGTTGTCAATCAAATAACAAAACCTCCTAA
ACATCTACGAGGCCTCGTTATAGGCTGCTGTGCTGCAGGAAACATGGGCAACATGCTTCT
CATCATAATTCCAGCTGTTTGTAAGGAGAAAGGAAGCCCATTCGGAGTGCCTGATATTTG
CCATACATATGGTATGGGTTATGCTTCCCTTTCAATGGCGGTATGCGCGGTTTTTCTATG
ATCTTATGTGTATAATATAGTCAGAATATCATCAAGTAAGAGCCCCGAAGAGGTTGAAGT
TGTTAACGATTCCTCCATAAGTAAATCTGCCAGAGAAAGCTCCATAGCAGAACTCGGGGT
CTCTACGGAGCCACTGCTTCAGACAAATGACTTAGCATTATCAGAGCACCAATCTGAACA
ACTTGCATTGCCCTCTACTAGATTTGACGATAAATCTCAGGTTTCACTATGGACTAAATC
GAGACAGTACATGGGAGTGCTTTCAAAGAAGATGAACCTGAAGAAATTATTAGCCCCTTC
TACCTGCGGAGCGATTGCAGGTTTTGTTGTTGGACTTATACCTCAGATCAGAAATGCAGT
TATAGGTGATGCAGCTCCTCTTCATGTGATTCAAGATACAGCTTTGATACTTGGAGATGG
AGCTGTTCCGCTTCTAACGCTGATCATGGGAGGTAACCTTTTAAAAGGTTTGAGGGTCTC
AGTAGTTCCGAAATCTATTCTTGCTGGCATTATCGTTGTCAAATACATTGCGATGCCTGT
GATTGGTATTGGTGTTGTCAAAGGTGCTTCTTGGTTAGGCTTGGTACATGATGATCCATT
GTATAAGTTTGTTCTTTTACTTCATTTTGCACTTCCACCAGCAATGAACATTGCAACCAT
AACACAGTTGTTTGGAGCTGGTGAGAGCGAGTGTTCAGTGATTATAGTTGTGGACTTATG
CATTGGCTTCAGCAGCACTTACACTATGGACAGCATTCTTCATGTGGCTTGTATCATGAG
CACACTATTTCTAGAGGAAAAACGCCAAACTCCACGTGTGAGATTATACTGGATATGTTA
TTATTGTTTGAGAAAAAACAGAGATTAGAAATGAATTAAATGACTAGGAGAAAAAATGAT
GGTTCTACTTATGTACAATAAGGATTTGCACCCCAAAAATGGGAAATATGTATCGGTTGT
TTACATCGAATCAATCTAATTTACC
