Microarray Probes on PGSC0003DMT400075595
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8317_PI426222305 |
JHI_St_60k_v1 |
TTGCACCCCAAAAATGGGAAATATGTATCGGTTGTTTACATCGAATCAATCTAATTTACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075595
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075595 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G20925.1 |
+3 |
7e-45 |
164 |
74/150 (49%) |
Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472 |
Transcript Sequence (1319 bp)
>PGSC0003DMT400075595 1319 pgsc_dm_v3.4
TTTGAATTTTGATCTCTGAGTTCCTGTAACAGGTTTCACTATGGACTAAATCGAGACAGT
ACATGGGAGTGCTTTCAAAGAAGATGAACCTGAAGAAATTATTAGCCCCTTCTACCTGCG
GAGCGATTGCAGGTTTTGTTGTTGGACTTATACCTCAGATCAGAAATGCAGTTATAGGTG
ATGCAGCTCCTCTTCATGTGATTCAAGATACAGCTTTGATACTTGGAGATGGAGCTGTTC
CGCTTCTAACGCTGATCATGGGAGGTAACCTTTTAAAAGGTTTGAGGGTCTCAGTAGTTC
CGAAATCTATTCTTGCTGGCATTATCGTTGTCAAATACATTGCGATGCCTGTGATTGGTA
TTGGTGTTGTCAAAGGTGCTTCTTGGTTAGGCTTGGTACATGATGATCCATTGTATAAGT
TTGTTCTTTTACTTCATTTTGCACTTCCACCAGCAATGAACATTGGTAAGTTGATTCAAC
AAGTTATGCTTTTGTTCTATTATCATTTTTATTCGAGTTAATGGTGAAAAATACACCTAA
AGTATCTGAGTTTTTGAGTTTCAAAACCTAACTGAACTATCAGGTGTGTGAGTTTCCTAG
CTGAAATATCATAACCGTTCAGGTAGGAAAAATGAACAATTGATGGTTGAGGTGTGTTTT
GAGGAATAGTTAGTGATAGTTCAAGTAGAAAACTCACACACTTGATAGTTCACGTATGAA
ACTAAAAGTATCGGGATACTTTGGGTGTGTTTTTTGACCCTTCACTCTATTTCTGATAGA
CCTTCGACTCAAATAAAGCATATAAAAAATTGTATGAAAACAAAATATAGTATCCAATAT
AAAAAATCAAGCAGAGATTGTTATTTCTTTGTGTATATATCAGTTCATCATCTGTTAATG
AACGTATCGTTTGCTTCGTCTTGCTCAATTACGTATAGTTGTTATAGAGAGATTTGACTG
TTTACGTGAACGCGGTTTTATTTGCAGCAACCATAACACAGTTGTTTGGAGCTGGTGAGA
GCGAGTGTTCAGTGATTATAGTTGTGGACTTATGCATTGGCTTCAGCAGCACTTACACTA
TGGACAGCATTCTTCATGTGGCTTGTATCATGAGCACACTATTTCTAGAGGAAAAACGCC
AAACTCCACGTGTGAGATTATACTGGATATGTTATTATTGTTTGAGAAAAAACAGAGATT
AGAAATGAATTAAATGACTAGGAGAAAAAATGATGGTTCTACTTATGTACAATAAGGATT
TGCACCCCAAAAATGGGAAATATGTATCGGTTGTTTACATCGAATCAATCTAATTTACC
