Microarray Probes on PGSC0003DMT400075593
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8222_PI426222305 |
JHI_St_60k_v1 |
TTGCACCCCAAAAATGGGAAATATGTATCGGTTGTTTACATCGAATCAATCTAATTTACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075593
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075593 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G20925.1 |
+2 |
9e-26 |
109 |
47/84 (56%) |
Auxin efflux carrier family protein | chr1:7289973-7292507 FORWARD LENGTH=472 |
Transcript Sequence (1489 bp)
>PGSC0003DMT400075593 1489 pgsc_dm_v3.4
GCCAAAAATTAGCTTAACCACTTGGAAAGATAGGATGTTTGAACTGAAAAAGGAAAAGTT
CAGTGACATAATTAAACAACATAATTTATAAACAAACACTTCAACTTGGCTTCAGCTGAC
AAGTAAGCACTCGAGCTTTGAGAGTGCATATCTAGACACTTCAACTTGGTCTAAACTCTC
AACTGACAACTATATACTCCAACTCATTCTCATTTTGTGTCTAGATGATCATTTTGTAAG
TTGAAGTATTCAACTGACAGAGTGAAAACGAGTTGAGGTATCTAGATGTGCATTCTTACT
TGCCAACAAAGGTCAAGTTTGAGTGTGTTCACTTAAATTGTCAACCCTTTTGTCTGGTTG
AAGAAATTGATATTTACATTTCATCAATGACTGCAGAGATGGAGCTGTTCCGCTTCTAAC
GCTGATCATGGGAGGTAACCTTTTAAAAGGTTTGAGGGTCTCAGTAGTTCCGAAATCTAT
TCTTGCTGGCATTATCGTTGTCAAATACATTGCGATGCCTGTGATTGGTATTGGTGTTGT
CAAAGGTGCTTCTTGGTTAGGCTTGGTACATGATGATCCATTGTATAAGTTTGTTCTTTT
ACTTCATTTTGCACTTCCACCAGCAATGAACATTGGTAAGTTGATTCAACAAGTTATGCT
TTTGTTCTATTATCATTTTTATTCGAGTTAATGGTGAAAAATACACCTAAAGTATCTGAG
TTTTTGAGTTTCAAAACCTAACTGAACTATCAGGTGTGTGAGTTTCCTAGCTGAAATATC
ATAACCGTTCAGGTAGGAAAAATGAACAATTGATGGTTGAGGTGTGTTTTGAGGAATAGT
TAGTGATAGTTCAAGTAGAAAACTCACACACTTGATAGTTCACGTATGAAACTAAAAGTA
TCGGGATACTTTGGGTGTGTTTTTTGACCCTTCACTCTATTTCTGATAGACCTTCGACTC
AAATAAAGCATATAAAAAATTGTATGAAAACAAAATATAGTATCCAATATAAAAAATCAA
GCAGAGATTGTTATTTCTTTGTGTATATATCAGTTCATCATCTGTTAATGAACGTATCGT
TTGCTTCGTCTTGCTCAATTACGTATAGTTGTTATAGAGAGATTTGACTGTTTACGTGAA
CGCGGTTTTATTTGCAGCAACCATAACACAGTTGTTTGGAGCTGGTGAGAGCGAGTGTTC
AGTGATTATAGTTGTGGACTTATGCATTGGCTTCAGCAGCACTTACACTATGGACAGCAT
TCTTCATGTGGCTTGTATCATGAGCACACTATTTCTAGAGGAAAAACGCCAAACTCCACG
TGTGAGATTATACTGGATATGTTATTATTGTTTGAGAAAAAACAGAGATTAGAAATGAAT
TAAATGACTAGGAGAAAAAATGATGGTTCTACTTATGTACAATAAGGATTTGCACCCCAA
AAATGGGAAATATGTATCGGTTGTTTACATCGAATCAATCTAATTTACC
