Microarray Probes on PGSC0003DMT400075589
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8202_PI426222305 |
JHI_St_60k_v1 |
GGTATCAAATGAAGTTGTAATCACTAAATTTTGTGGGGAGAAGATAGTTTTAGCTTGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075589
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075589 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G52190.1 |
+2 |
2e-139 |
426 |
235/466 (50%) |
Major facilitator superfamily protein | chr1:19434671-19438673 FORWARD LENGTH=607 |
Transcript Sequence (2121 bp)
>PGSC0003DMT400075589 2121 pgsc_dm_v3.4
GCAAAACTTGGCAGAGGCATATGGTGCCACGAAGAAACTTCATGGAAAATGGGGGAAAAA
GCAACGAAGTAGGGCCAAAACAAATCGTTTTTTCTGCAATATTGCTCTGCTTTTTTGTTT
TATTTGATCAGCTCTTTTGTTTGTATATACCTGTAGTAGACGCTTGGTTGTTATCGCAGT
GTTTAACTGTCAGTGGTGAACTGTGAGTGATGCTAACAAAGTTGAAAGAGGGAGAGGGTT
TTTTTTCTCTCTTGTTTGTTATAGACTGATCGTACACATATGGAGAATTTGTTGTGTGAA
AAAGGTGAAATGATCGAACAGACTTTGCTATTAGATGATTCTGAAACTCAAAAGGGTGGA
TTCAGAACTTTACCTTTCATACTTGGGGATGTTTATGTTTTGGCTGACATCAGTGATTCC
GCAAGCAAGGCCCCCGCCCTGTGTCAATTCCAACAACATTTGCAGATCAGCAGAGATGTT
CCAACTCTTCTTCCTGTGTTTCTCTTTGGGCATCGTTGCCATTGGAGCAGGTGCAGTCAA
ATCCTCATCTTTAGCATTTGGTTCTGATCAGTTGAAACGGGAAGTATATCAAGATAATGC
GCGTTTAATGGAGAGATACTTCAGCTGGTACTATGCCTCGTATGCTTTGTCTATCCTGGT
TGCTCTCACGTGTCTTGTTTATATCCAAGTCAACATGGGGTGGGCTTTAGGTTTTGGAGC
TCCTGTTTTGCTAATGTTGTTTTCAACTCTTCTAATTTATTTGGGTACTCCATTCTATGT
GAAGCTGAAGCCTAAATCGAGCTTAATCACTGGCCTTTTTCAAGTGATTGTAGCCTCTTA
TAGAAATAGATGTCTCAAATTGTCGTCACAGAGTGAAGATATACAATATCATCAGAAAAA
AGGGTCAACCGTAGTTCTTCCAAGTGAAAAACTAAGGTTTTTGAATAAAGCTTGCATTGT
ACAAGATCCTCGACTAGATTTGAGCCCAGATGGAGAAGCAATAGATCCCTGGCGTCTTTG
CACTGTAGATCAAGTAGAGGAGCTGAAAGCATTGCTCAAAGTTGTTCCAATCTGGTTGAC
GGGAGTTGTATTGTCCATAAACATAAGCCAGAACACTTTTCCTGTACTTCAAGCGAATAC
CATGGATCGACATATTGGTTCAAGCTTTGAAATCCCAGCTGCCTCCTTTGGCATATTTGC
TGTCATCTCTGCTATACTTTGGATTGTCCTCTACGATTATCTGATTCTTCCCATTGCATC
AAAAATGACTGGAAAGCCTGCTCATTTCAGCACAAAAGAGAGAATGGGGTTCGGGTTGTT
TCTTTCCTTCCTGTCAGTTTTAGTGGTTGCAGTTGTAGAAGGTGTACGGAGAAGTATCGC
AATCAAGGAGGGGTACTTGGATGATCCAGAAGGTGTGATCCCTATGTCAGCTATGTGGCT
ACTTCCCCAGAATTCCCTTACTGGCTTCGCAGAGGCCCTGCATGCCATCGGCCAAAACGA
ATTCTACATTTCAGAATTTCCTAGAAGCATGTCTAGTGTAGCTGCTTCTCTATTAGGAGT
TGGTATGGGAGTTGGAAGCTTACTAGCTAGCTCTATAATGAGTACTATCGACGACCTGAC
TAAAAGAGGAGGGGAAGAAAGTTGGGTATCGAGCAATATAAACAAGGGCCATTACGACTA
CTATTATCTCGTTCTTGCAGGATTTAGTCTGGTTAACATACTGTGCTATATTGTTTGTAG
TAAAGCTTATGGTCCATGCAAAGAAGAGGTGATGGAAGAAGAGAAGCCATGAATGGGTAC
AAGAACTTGTATATCGTAGCTCGAAACGCGCCAATCTATTATCCATATAGTGTCATGCCT
ATTTCCTCATAGCTTGTTAGTAGTAATATATATACTTTTCGGTTGATCCAGTCCTTTCCT
GGATCCGTACATAGTAAGAACTTAGTGCATCGTTATGTTCTTTTTAACTTCTTTTTTTTA
TATATACTTATCAGCTGAGCATGACTGATGCTAATGTAGGTATCAAATGAAGTTGTAATC
ACTAAATTTTGTGGGGAGAAGATAGTTTTAGCTTGGTGTAAATAACTTTATATACTTGAA
GAAGTATATTTTTGTGTAGTT
