Microarray Probes on PGSC0003DMT400075394
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8110_PI426222305 |
JHI_St_60k_v1 |
TCTCAATGAATGCGTGAGCTTCTGTTAACTTGGTATGATTGTGAAGTTGGTATGAAGGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400075394
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400075394 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G20510.1 |
+2 |
0.0 |
721 |
410/546 (75%) |
OPC-8:0 CoA ligase1 | chr1:7103645-7105856 REVERSE LENGTH=546 |
Transcript Sequence (2033 bp)
>PGSC0003DMT400075394 2033 pgsc_dm_v3.4
AAAAAATCAATAAAGCAACAGTCAACTTTTGTGATCTACAAATATTCTATTATAACTTCT
CAGATCCAAAATCTGTTATAAAATTCCTAATTTTTCAGTTTAAAAGCATACTACTAACTA
CTTTTCGAGTGTGGTGAAATAGATAGACATTCAATTCCGCAGCAGCTAGTTTTGCACGGC
CATAATGGCACAGTATAACAATAATCCAACCGTCGATCCAAATTCCGGCTATTCTCCGGC
GAACTCAACTTTCTACAGCAAACGTAAACCGATTCCGTTTCCGGCGAATGAATCTCTTGA
TGTAACCACTTTCATTTCTTCACGAGCACATAGTGGGAAAATCGCTTTCATCGACGCTAC
CACCGGTCGGAAACTCACTTTCTCCGACGTCTGGAACGCCGTTGAATCCTTAGCTACCAG
TCTATCCGTTGATATGAGTATTCGTAAAGGTGACGTTGTTCTTCTCCTTTCTCCTAATTC
CATCTTCTTCCCCATTATTTGCCTCGCCGTAATGTCACTCGGAGCTATAATCACTACAAC
AAATCCACTCAACACGAACAACGAAATCGCTAAACAGATCAAGGATTCGAACCCTGTTCT
CGCCTTTACAATCCCTCAACTCCTCCCGAAACTCACCGGATCTAATCTCCCGGTGATTCT
AATCGACGGAGTGAATGATTCAAATTCAAATCTCAAAATCGTTGGGGATTTACAAAAAAT
GATTCAGAGAAAACCCAGTGAAAGCAGATTGAAAGAGCGAGTTACACAAAACGACGTAGC
TACTCTGCTTTACTCATCTGGTACTACCGGAGCAAGCAAAGGAGTTATTTCGTCTCACAA
AAACTTAATCGCCATGGTTCAAACTATAGTCGGTCGATTCAATCTAGACGAAGGTGTACG
AACCTTCATTTGTACTGTACCTATGTTTCATATTTACGGATTAGCAGCTTTTGCAGCTGG
GTTATTAGCATCTGGATCTACTGTTGTTGTACTATCAAAATTCGAAATGGATGAAATGCT
CTCATCGATTCACAAATACAAAGCAACTTCTCTACCATTAGTGCCTCCGATTCTCGTCGC
GCTTGTGAATAACGCTGATTTGATTAAGAAAAAATATGATTTGAGCAGCTTGGTGAGTGT
TCTCTCCGGCGGTGCGCCGTTGAGTAAGGAAGTAATTGAAGGATTTGTAGAGAAATATCC
ATCTGTGAGGATTTTGCAAGGGTATGGGTTGACGGAGTCGACCGGAATTGGGGCGTCGAC
GGATTCTTTGGAGGAGAGCCGGAGATATGGAACGGCGGGAATGTTGTCGCCGAGCATGGA
AGGGAAAATTGTTGATCCGGAGAGTGGGAAGGCTTTGCCGGTGAATAAGACCGGTGAGCT
TTGGCTAAGAGGGCCTACCATTATGAAAGGTTATTTCAGTAATGAAGAAGCTACTGCTTC
CACTCTAGACTCTGATGGATGGTTAAGAACTGGAGATCTATGCTATATAGATGAAGATGG
TTTCATTTTCGTGGTTGATAGATTAAAGGAGCTCATCAAATATAAAGGATATCAGGTTCC
TCCAGCAGAGTTAGAGGCTTTGTTGCTCACTCATCCAGAAATTTCTGATGCTGCTGTTAT
ACCGTTTCCGGATAAGATGGTTGGACAGTTTCCTATGGCATATGTAGTACGAAAAACTGG
AAGTACTATATCAGCGAGTGCAGTCATGGATTTCATTGCGAAACAGGTTGCTCCATACAA
GAGAATTCGGAGAGTTGCATTTGTGGCTTCCATACCGAAGAATCCTTCTGGCAAAATACT
TAGGAAGGATTTAATAAAGCTAGCAACATCAAAACTCTGAGAACAAAAGTTATGATTTTT
GCATTTTAGTAAGTGTAACTTTTCAGCAGCCATAGTGTTGTTATTGTGCTAAATAATGAG
TGTATACTGAAGTTTATTCTTGTTGATTATAAGTAATTTGAAGAGTTCTATCTTCTCAAT
GAATGCGTGAGCTTCTGTTAACTTGGTATGATTGTGAAGTTGGTATGAAGGGA
